proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

4 files changed, 150 insertions, 0 deletions

diff --git a/sci-chemistry/threeV/Manifest b/sci-chemistry/threeV/Manifest
new file mode 100644
index 000000000000..87b89d3f552f
--- /dev/null
+++ b/sci-chemistry/threeV/Manifest
@@ -0,0 +1 @@
+DIST 3v-1.2.tgz 599194 RMD160 133d770fd2c7c353b05db74594998954be92e9a0 SHA1 86895fb5c33360db2c30cec258dacbc01f39638a SHA256 ae11ce61e6b7cac6aa07d91914b59507a04a1dbfbe624ed8356154cbabc6e8af
diff --git a/sci-chemistry/threeV/files/1.2-gentoo.patch b/sci-chemistry/threeV/files/1.2-gentoo.patch
new file mode 100644
index 000000000000..0827551599ba
--- /dev/null
+++ b/sci-chemistry/threeV/files/1.2-gentoo.patch
@@ -0,0 +1,107 @@
+diff --git a/src/Makefile b/src/Makefile
+index a58462c..616f51a 100644
+--- a/src/Makefile
++++ b/src/Makefile
+@@ -1,7 +1,7 @@
+-CC = g++
+-EXT=$(shell ./cpuflags.pl --opt )
+-FLAGS = -Wall $(EXT)
+-#FLAGS = -O3 -Wall -ffast-math
++CXX ?= g++
++#EXT=$(shell ./cpuCXXFLAGS.pl --opt )
++#CXXFLAGS = -Wall $(EXT)
++#CXXFLAGS = -O3 -Wall -ffast-math
+ OBJS = utils-main.o utils-output.o utils-mrc.o
+ 
+ all:	cav chan fsv sol tun vdw vol
+@@ -17,54 +17,65 @@ volume:	vol
+ objects:	utils-main.o utils-output.o utils-mrc.o
+ 
+ cav:	objects cavities.cpp
+-	$(CC) $(FLAGS) -o Cavities.exe $(OBJS) cavities.cpp
+-	chmod 777 Cavities.exe
+-	mv Cavities.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o cavities.o cavities.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o Cavities $(OBJS) cavities.o
++	chmod 755 Cavities
++	mv Cavities ../bin
+ 
+ chan:	objects channel.cpp
+-	$(CC) $(FLAGS) -o Channel.exe $(OBJS) channel.cpp
+-	chmod 777 Channel.exe
+-	mv Channel.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o channel.o channel.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o Channel $(OBJS) channel.o
++	chmod 755 Channel
++	mv Channel ../bin
+ 
+ fsv:	objects fsv_calc.cpp
+-	$(CC) $(FLAGS) -o FsvCalc.exe $(OBJS) fsv_calc.cpp
+-	chmod 777 FsvCalc.exe
+-	mv FsvCalc.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o fsv_calc.o fsv_calc.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o FsvCalc $(OBJS) fsv_calc.o
++	chmod 755 FsvCalc
++	mv FsvCalc ../bin
+ 
+ sol:	objects solvent.cpp
+-	$(CC) $(FLAGS) -o Solvent.exe $(OBJS) solvent.cpp
+-	chmod 777 Solvent.exe
+-	mv Solvent.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o solvent.o solvent.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o Solvent $(OBJS) solvent.o
++	chmod 755 Solvent
++	mv Solvent ../bin
+ 
+ tun:	objects tunnel.cpp
+-	$(CC) $(FLAGS) -o Tunnel.exe $(OBJS) tunnel.cpp
+-	chmod 777 Tunnel.exe
+-	mv Tunnel.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o tunnel.o tunnel.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o Tunnel $(OBJS) tunnel.o
++	chmod 755 Tunnel
++	mv Tunnel ../bin
+ 
+ vdw:	objects vdw.cpp
+-	$(CC) $(FLAGS) -o VDW.exe $(OBJS) vdw.cpp
+-	chmod 777 VDW.exe
+-	mv VDW.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o vdw.o vdw.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o VDW $(OBJS) vdw.o
++	chmod 755 VDW
++	mv VDW ../bin
+ 
+ vol:	objects volume.cpp
+-	$(CC) $(FLAGS) -o Volume.exe $(OBJS) volume.cpp
+-	chmod 777 Volume.exe
+-	mv Volume.exe ../bin
++	$(CXX) $(CXXFLAGS) -c -o volume.o volume.cpp
++	$(CXX) $(CXXFLAGS) $(LDFLAGS) -o Volume $(OBJS) volume.o
++	chmod 755 Volume
++	mv Volume ../bin
+ 
+ utils-main.o:	utils-main.cpp
+-	$(CC) $(FLAGS) -c -o utils-main.o utils-main.cpp
++	$(CXX) $(CXXFLAGS) -c -o utils-main.o utils-main.cpp
+ 
+ utils-output.o:	utils-main.o utils-output.cpp
+-	$(CC) $(FLAGS) -c -o utils-output.o utils-output.cpp
++	$(CXX) $(CXXFLAGS) -c -o utils-output.o utils-output.cpp
+ 
+ utils-mrc.o:	utils-mrc.cpp
+-	$(CC) $(FLAGS) -c -o utils-mrc.o utils-mrc.cpp
++	$(CXX) $(CXXFLAGS) -c -o utils-mrc.o utils-mrc.cpp
++
++install:
++	install -d $(DESTDIR)/usr/bin
++	install ../bin/* $(DESTDIR)/usr/bin/
+ 
+ clean:
+ 	rm -fv *.o  *~
+ 
+ distclean:
+-	rm -fv *.o ../bin/*.exe *~
++	rm -fv *.o ../bin/* *~
+ 
+ none:	
+ 	echo "Please type make xxx, where xxx = cav, cha, fsv, sol, tun, vdw, or vol"
diff --git a/sci-chemistry/threeV/metadata.xml b/sci-chemistry/threeV/metadata.xml
new file mode 100644
index 000000000000..043cc7527474
--- /dev/null
+++ b/sci-chemistry/threeV/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<herd>sci-chemistry</herd>
+<maintainer>
+  <email>jlec@gentoo.org</email>
+</maintainer>
+</pkgmetadata>
diff --git a/sci-chemistry/threeV/threeV-1.2.ebuild b/sci-chemistry/threeV/threeV-1.2.ebuild
new file mode 100644
index 000000000000..7aaa18bba004
--- /dev/null
+++ b/sci-chemistry/threeV/threeV-1.2.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI="3"
+
+inherit eutils toolchain-funcs
+
+DESCRIPTION="3V: Voss Volume Voxelator"
+HOMEPAGE="http://geometry.molmovdb.org/3v/"
+SRC_URI="http://geometry.molmovdb.org/3v/3v-${PV}.tgz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+PDEPEND="sci-chemistry/msms-bin"
+#	sci-chemistry/usf-rave"
+
+S="${WORKDIR}/3v-${PV}/src"
+
+src_prepare() {
+	epatch "${FILESDIR}"/${PV}-gentoo.patch
+	tc-export CXX
+	emake distclean || die
+}
+
+src_install() {
+	emake DESTDIR="${ED}" install || die
+
+	cd ..
+	dodoc AUTHORS ChangeLog QUICKSTART README TODO VERSION || die
+}