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authorMichael Schubert <mschu.dev@gmail.com>2024-11-11 13:59:05 +0000
committerNowa Ammerlaan <nowa@gentoo.org>2024-11-13 14:33:24 +0100
commitce12d41df7b9ff0999b2998d407edb57abe7b9ea (patch)
tree09bd085ad31206561eb68ed2f1d9eb7d74cbbfa5
parentdev-python/pyfaidx: version bump 0.8.1.3 (diff)
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sci-biology/bx-python: version bump 0.13.0
Signed-off-by: Michael Schubert <mschu.dev@gmail.com> Closes: https://github.com/gentoo/sci/pull/1297 Signed-off-by: Nowa Ammerlaan <nowa@gentoo.org>
-rw-r--r--sci-biology/bx-python/Manifest2
-rw-r--r--sci-biology/bx-python/bx-python-0.13.0.ebuild (renamed from sci-biology/bx-python/bx-python-0.12.0.ebuild)6
2 files changed, 2 insertions, 6 deletions
diff --git a/sci-biology/bx-python/Manifest b/sci-biology/bx-python/Manifest
index 69572ef1e..73b861a86 100644
--- a/sci-biology/bx-python/Manifest
+++ b/sci-biology/bx-python/Manifest
@@ -1 +1 @@
-DIST bx-python-0.12.0.gh.tar.gz 1660806 BLAKE2B 0eddb9b9a93520319d275001067a3518015483605cf4d096729ec92e14c0eb35f2ceb34db964216dd3c6687351a7415c46061960b1f66a7564c90efeba3a587b SHA512 821b33841dd2935485669f6c112277d404475b1cd778deb3eaa1194f3b21594335a219d9345e279e7afc3adb1e347e71e60f0029712fc58e95d1e70f9e8fbb55
+DIST bx-python-0.13.0.gh.tar.gz 1611987 BLAKE2B 138c081c60249e492cbb1474f88a92faadc76c5340555599d93a97a7d8b8e5130e71724f18174262dff3f286678f3d5cac03362aadadf81ecd90a0b6f621927c SHA512 345faf1f42b24ae97216bb9d231e7f97093cd607d51fe51129335e2c077e47dc30a3657b27733674caace5f32eebab8ef64a3f912c585fabf07333722d24317c
diff --git a/sci-biology/bx-python/bx-python-0.12.0.ebuild b/sci-biology/bx-python/bx-python-0.13.0.ebuild
index 1a00b0395..0062da958 100644
--- a/sci-biology/bx-python/bx-python-0.12.0.ebuild
+++ b/sci-biology/bx-python/bx-python-0.13.0.ebuild
@@ -17,6 +17,7 @@ LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"
+BDEPEND="test? ( dev-python/python-lzo[${PYTHON_USEDEP}] )"
RDEPEND="dev-python/numpy[${PYTHON_USEDEP}]"
DEPEND="dev-python/cython[${PYTHON_USEDEP}]"
@@ -28,11 +29,6 @@ PATCHES=(
distutils_enable_tests pytest
# https://github.com/bxlab/bx-python/issues/101
-EPYTEST_DESELECT=(
- lib.linux-x86_64-cpython-312/bx/binned_array_tests.py::test_file_lzo
- lib.linux-x86_64-cpython-312/bx/binned_array_tests.py::test_binned_array_writer
-)
-
python_test() {
cd "${BUILD_DIR}/build" || die
ln -s "${S}/pytest.ini" . || die