sci-libs/cifparse-obj: Bump EAPI and fix linking

Package-Manager: portage-2.2.15/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

4 files changed, 87 insertions, 18 deletions

diff --git a/sci-libs/cifparse-obj/ChangeLog b/sci-libs/cifparse-obj/ChangeLog
index 8374a7c4f431..e2b569bf24dd 100644
--- a/sci-libs/cifparse-obj/ChangeLog
+++ b/sci-libs/cifparse-obj/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-libs/cifparse-obj
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/cifparse-obj/ChangeLog,v 1.15 2012/06/02 12:57:09 jlec Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/cifparse-obj/ChangeLog,v 1.16 2015/01/11 20:38:27 jlec Exp $
+
+*cifparse-obj-7.025-r1 (11 Jan 2015)
+
+  11 Jan 2015; Justin Lecher <jlec@gentoo.org> +cifparse-obj-7.025-r1.ebuild,
+  metadata.xml:
+  Bump EAPI and fix linking
 
   02 Jun 2012; Justin Lecher <jlec@gentoo.org> cifparse-obj-7.025.ebuild,
   +files/cifparse-obj-7.025-gcc4.7.patch:
diff --git a/sci-libs/cifparse-obj/Manifest b/sci-libs/cifparse-obj/Manifest
index 5b5e1d196281..35a1b7804cb4 100644
--- a/sci-libs/cifparse-obj/Manifest
+++ b/sci-libs/cifparse-obj/Manifest
@@ -1,21 +1,33 @@
 -----BEGIN PGP SIGNED MESSAGE-----
 Hash: SHA512
 
-AUX cifparse-obj-7.025-gcc4.3.patch 3926 RMD160 60729a67ca24e74b4f72bb144cc7b8727828a327 SHA1 950582611d506b53531c44f87c79112807832757 SHA256 784a0f0a08fae029152c4f995740f94ec13cbc37d193d89d137f539dd4d6e789
-AUX cifparse-obj-7.025-gcc4.7.patch 2339 RMD160 3b01f4105a2ae0a1729d69837ec4453929bc0a6c SHA1 1725ab716397a6dba96a3a656035cd52fe377171 SHA256 41f442585c48e85fd08a41a13817f4223ec24044cbb32386e9f6db83e9676c6a
-AUX cifparse-obj-7.025-makefile.patch 4405 RMD160 5d8bf301a5ad26829c1be70b0174e38765a9707d SHA1 5560bdb1cb3a910b488f47da22081570d8a84553 SHA256 1b70620f492e027f01273f316e6bf543b22c1586555d9df5a589edaa7cdc3a79
-AUX respect-flags-and-add-gcc4.patch 10289 RMD160 499064392ba6688096d32d00a4b67fe31907eae8 SHA1 d92860ac4ac13e9f99794b98a4d99037910f4062 SHA256 dd25733544c0c8f78d6c1c26e78404bcecdaa71e5339f74c547f229c427bed9c
-DIST cifparse-obj-v6.302-prod-src.tar.gz 782727 RMD160 6562c8c9593446a54a3a83d4f1aefbc36a67fdd3 SHA1 33495f47170aaba35fe9081ad2955af3f9c38a8a SHA256 0a0676083594da63811fccfce50bcbe0a0c3623df8773d319120cf2d758f4cd1
-DIST cifparse-obj-v7.025-prod-src.tar.gz 928484 RMD160 e87b6a5995966946f7554283d18dec06924cef0e SHA1 bb09169aaa06ba858bdb8741603c1b5284943090 SHA256 f2fd71fc2af0995839d9ee7825403e383209bb45a1bad68c270e5756476a8ef8
-EBUILD cifparse-obj-6.302.ebuild 946 RMD160 3ea754352614b9a688483c2d50a78598d1d8dd0b SHA1 c59a27af4f6d1dda7ae91030b1d9827167e4078f SHA256 aa9d3fbe26be47ce2d99c638c7beee46b9e6b1200858a29b0e4249a0a69f4d0d
-EBUILD cifparse-obj-7.025.ebuild 1329 RMD160 f7b4c6cf69a51e2a06b60062bd2b1f06054f5306 SHA1 971795d71305160cbfb16b33468889820d5e490e SHA256 4a4d9103ed186c9be43f3948b0a6db3a14fd4123f1cdbfccacea537baeffc63a
-MISC ChangeLog 2350 RMD160 25a61fb47d58a83e62e447d92d45bdd392defd7f SHA1 f32a4718f773d2519a25521c48b5549bcbd9cfbe SHA256 d8979be02bd12673f0c4426c6a4e848a4381104ab02e1b709990f3ce4d7d6d4b
-MISC metadata.xml 167 RMD160 ea4003a55d6e2079381a540c441fc59cde29025a SHA1 3bc6dc4dd68f7de22828138e62aa117387b1765d SHA256 f313eeec4ebffac500b57a98a225e32c77489fc826a50494749b6cdeec28e3e8
+AUX cifparse-obj-7.025-gcc4.3.patch 3926 SHA256 784a0f0a08fae029152c4f995740f94ec13cbc37d193d89d137f539dd4d6e789 SHA512 4ae441c3b576817e0302f69cceb1dd04f17bfff5226c888557732c49f4dac336d12014dc699e2703a248597eb04a118c2037a3defc18e0e3aed1fa73dd5ba892 WHIRLPOOL 5bc3f60946914863f3c6316cd58434e3ca7210e051c6b7c96fda3e0a38cf8506a4f686425c5b3b417b3c58e1c4a675132898b2f856cf6fb85624b54e36de2f5a
+AUX cifparse-obj-7.025-gcc4.7.patch 2339 SHA256 41f442585c48e85fd08a41a13817f4223ec24044cbb32386e9f6db83e9676c6a SHA512 f4ca881116a0bfb5688d441f0a29abd81fc173bb496b6640128054fc2307b88a5a02d4ebcc6c9203af091302a104474b0767f9373c334955a691a865853efd03 WHIRLPOOL bc78efcf3287e5e919fce68230dc17c7cc5d79ebea3363476b882db4e0baed950c9eda35058fc39d4c6a68941f8e0eec54b56a1d11f240faa3d2394d9df939fa
+AUX cifparse-obj-7.025-makefile.patch 4405 SHA256 1b70620f492e027f01273f316e6bf543b22c1586555d9df5a589edaa7cdc3a79 SHA512 8e74758f8ff8993a6e304a0cf80e59f60d0d162aee8f3a798552534f51055406d35c2bc1c6b91b6d9e41ff2d2666ea1d5580c71a66f1c3485c7e86deee169c69 WHIRLPOOL 446589a8914e507f0dd98c3a3470d072755a13deb96d1a83fdbaec5034478c92414a5e634bc16473ef7ea38fb8d1df3741b32f63d612aaa079a236b08fdf4384
+AUX respect-flags-and-add-gcc4.patch 10289 SHA256 dd25733544c0c8f78d6c1c26e78404bcecdaa71e5339f74c547f229c427bed9c SHA512 d9031d93e6cf1019c85013833b823b3c33df6924b8df52c5bb709f6d583aa166ae5c0f6d1e92cd23865399c6d54de0478b4300d6e51a1e5a6858dfecee840489 WHIRLPOOL 2e9abb5f48b1767e709ecb8dae35fe1806d7aa37b217d03ed352cd04999b6051a3c6b5592c0d5014eb5d8986e4b02b033a0dbd8663db2c00a8b51ba5afefa6da
+DIST cifparse-obj-v6.302-prod-src.tar.gz 782727 SHA256 0a0676083594da63811fccfce50bcbe0a0c3623df8773d319120cf2d758f4cd1
+DIST cifparse-obj-v7.025-prod-src.tar.gz 928484 SHA256 f2fd71fc2af0995839d9ee7825403e383209bb45a1bad68c270e5756476a8ef8 SHA512 bf5d6b55592aca8678396eb9819f5bd7bff4d912410590dfb750c9ad85bdcdbd251425c45b67e2db027a8ce8d028b77c91edcc5333279ed1190f6049c01f5cc9 WHIRLPOOL 0bd0376f3ea1d562c9650186dd1b48eef454f8acd0f4c0e074a1fccbbccf6edbef2d3e2dcd92799c1e15f0e0a4f1d32a50aaee0120c06ef846f6c971cede4924
+EBUILD cifparse-obj-6.302.ebuild 946 SHA256 aa9d3fbe26be47ce2d99c638c7beee46b9e6b1200858a29b0e4249a0a69f4d0d SHA512 a80cdb065b474a59b867ea663db51e78b530cb0bdc4c6e7a64326c2a70ecd0d97cb0fcc58f85a0461869aa0268e857225dc945515b2592e658ef480c0ed46690 WHIRLPOOL 2d9c3173703ae05df72850753c5762d12dd22b79b251dff9e7b2caede88430ef9eb9911b2d4b869fddccd5c519919763c6d7cea6630efa8963491c4d3cc45148
+EBUILD cifparse-obj-7.025-r1.ebuild 1236 SHA256 ff1061eba45d2426011400957fab1087d816406501ccce6514616b9c9c436b7d SHA512 c152f2e1615190dae750e3c81b16d1233254d497380719af3ac2da73fbf026655d70b3e313fe32e40fcd0019e060497e1e9494349b0084b410cfaf92d173e27c WHIRLPOOL 9a47a856b6192b1ef2e13f66c98defac6db4f7e724cc3516643c6684f4ce21ab1b6a84bd3989597c36bfea5e2928e6efc2e9f5cd7c01d73de6511f52e670ea92
+EBUILD cifparse-obj-7.025.ebuild 1329 SHA256 4a4d9103ed186c9be43f3948b0a6db3a14fd4123f1cdbfccacea537baeffc63a SHA512 c4c34a7f02647fdadca6fb7fec683838869489fba2d5f0b0294f92bd550c0c7d014d6c44ce718c9ebc3673b1e7c2f808de5aac2dab3b03ed9f47b52e8da032e7 WHIRLPOOL acb56a940e5d6a539697ac4b88cbac1df753f7de6361830a8ccf5308a4b51c43d46356e4e9313be84258d606658b212782a8ff4163c34f979e5ab67b7f75744a
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+MISC metadata.xml 168 SHA256 705462092174cd3e2e3ec1557a28108a746b7351f803d8ca6d1b925b3111c3ff SHA512 f0073fb277e20adb7781aa6ea7f8237bc2d350f0aa43f0f0cca33e02cf52b8fc117bd984c11721ac519a2637ea145976148ac1aba7335dc74c42f7b9531cbed3 WHIRLPOOL 07dd7a302e695440f5033889e5b20cada57beedf17ad33f95d45fb5c39da98bf206eaff13334c20c1c08140a9c5e6041341d29c58efc5ca59b112b60e1662318
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diff --git a/sci-libs/cifparse-obj/cifparse-obj-7.025-r1.ebuild b/sci-libs/cifparse-obj/cifparse-obj-7.025-r1.ebuild
new file mode 100644
index 000000000000..b1a6d7b6e222
--- /dev/null
+++ b/sci-libs/cifparse-obj/cifparse-obj-7.025-r1.ebuild
@@ -0,0 +1,51 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/cifparse-obj/cifparse-obj-7.025-r1.ebuild,v 1.1 2015/01/11 20:38:27 jlec Exp $
+
+EAPI=5
+
+inherit eutils toolchain-funcs
+
+MY_P="${PN}-v${PV}-prod-src"
+
+DESCRIPTION="Provides an object-oriented application interface to information in mmCIF format"
+HOMEPAGE="http://sw-tools.pdb.org/apps/CIFPARSE-OBJ/index.html"
+SRC_URI="http://sw-tools.pdb.org/apps/CIFPARSE-OBJ/source/${MY_P}.tar.gz"
+
+LICENSE="PDB"
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
+IUSE=""
+
+RDEPEND=""
+DEPEND="
+	sys-devel/bison
+	sys-devel/flex"
+
+S="${WORKDIR}/${MY_P}"
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${P}-makefile.patch \
+		"${FILESDIR}"/${P}-gcc4.3.patch \
+		"${FILESDIR}"/${P}-gcc4.7.patch
+
+	sed \
+		-e "s:^\(CC=\).*:\1$(tc-getCC):g" \
+		-e "s:^\(CCC=\).*:\1$(tc-getCXX):g" \
+		-e "s:^\(F77=\).*:\1${FORTRANC}:g" \
+		-e "s:^\(F77_LINKER=\).*:\1${FORTRANC}:g" \
+		-e "s:-static::g" \
+		-i "${S}"/etc/make.* || die "Failed to fix makefile"
+}
+
+src_compile() {
+	# parallel make fails
+	emake -j1
+}
+
+src_install() {
+	dolib.a lib/*
+	insinto /usr/include/${PN}
+	doins include/*
+}
diff --git a/sci-libs/cifparse-obj/metadata.xml b/sci-libs/cifparse-obj/metadata.xml
index e42d0af60f42..51fdedab1b38 100644
--- a/sci-libs/cifparse-obj/metadata.xml
+++ b/sci-libs/cifparse-obj/metadata.xml
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-	<herd>sci-chemistry</herd>
+  <herd>sci-chemistry</herd>
 </pkgmetadata>