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authorMarkus Dittrich <markusle@gentoo.org>2009-11-03 05:40:26 +0000
committerMarkus Dittrich <markusle@gentoo.org>2009-11-03 05:40:26 +0000
commit84073a0961b9133fc047c2168e550e4a249e9ea7 (patch)
treee83cc0cad1e6159f48dc2d997223c5fc5d0ba167 /sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild
parentreroll patch for bug #206306 (diff)
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Version bump and removed old ebuilds.
Package-Manager: portage-2.1.7.3/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild')
-rw-r--r--sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild77
1 files changed, 0 insertions, 77 deletions
diff --git a/sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild b/sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild
deleted file mode 100644
index 24ef55bdcf14..000000000000
--- a/sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild
+++ /dev/null
@@ -1,77 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb2pqr/pdb2pqr-1.1.2.ebuild,v 1.10 2009/05/24 07:50:41 je_fro Exp $
-
-inherit eutils fortran multilib flag-o-matic distutils
-
-DESCRIPTION="pdb2pqr is an automated pipeline for performing Poisson-Boltzmann electrostatics calculations"
-LICENSE="GPL-2"
-HOMEPAGE="http://pdb2pqr.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
-
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86"
-
-DEPEND="dev-lang/python
- dev-python/numpy"
-
-RDEPEND="${DEPEND}"
-
-FORTRAN="g77 gfortran"
-
-src_unpack() {
- unpack ${A}
- cd "${S}"
-
- epatch "${FILESDIR}"/${P}-gcc4-gentoo.patch
- epatch "${FILESDIR}"/${P}-fpic-gentoo.patch
-}
-
-src_compile() {
- econf || die "econf failed"
- emake || die "emake failed"
-}
-
-src_install() {
- python_version
- INPATH="/usr/$(get_libdir)/python${PYVER}/site-packages/${PN}"
-
- insinto "${INPATH}"
- doins __init__.py || \
- die "Setting up the pdb2pqr site-package failed."
-
- exeinto "${INPATH}"
- doexe ${PN}.py || die "Installing pdb2pqr failed."
-
- exeinto "${INPATH}"/propka
- doexe propka/_propkalib.so || \
- die "Failed to install propka."
-
- exeinto "${INPATH}"/extensions
- doexe extensions/* || \
- die "Failed to install extensions."
-
- insinto "${INPATH}"/propka
- doins propka/propkalib.py propka/__init__.py || \
- die "Failed to install propka."
-
- insinto "${INPATH}"/src
- doins src/* || die "Installing of python scripts failed."
-
- insinto "${INPATH}"/dat
- doins dat/* || die "Installing data failed."
-
- # generate pdb2pqr wrapper
- cat >> "${T}"/${PN} << EOF
-#!/bin/sh
-${python} ${INPATH}/${PN}.py \$*
-EOF
-
- exeinto /usr/bin
- doexe "${T}"/${PN} || die "Failed to install pdb2pqr wrapper."
-
- dodoc ChangeLog NEWS README AUTHORS || \
- die "Failed to install docs"
- dohtml -r doc/* || die "Failed to install html docs."
-}