Including arpwarp interface

Package-Manager: portage-2.2_rc67/cvs/Linux x86_64

3 files changed, 95 insertions, 5 deletions

diff --git a/sci-chemistry/ccp4i/ChangeLog b/sci-chemistry/ccp4i/ChangeLog
index 698351279345..439b9f5fdcdc 100644
--- a/sci-chemistry/ccp4i/ChangeLog
+++ b/sci-chemistry/ccp4i/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-chemistry/ccp4i
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ccp4i/ChangeLog,v 1.1 2010/02/06 00:24:33 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ccp4i/ChangeLog,v 1.2 2010/03/20 17:27:06 jlec Exp $
+
+*ccp4i-6.1.3-r1 (20 Mar 2010)
+
+  20 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org>
+  +ccp4i-6.1.3-r1.ebuild:
+  Including arpwarp interface
 
 *ccp4i-6.1.3 (06 Feb 2010)
 
diff --git a/sci-chemistry/ccp4i/Manifest b/sci-chemistry/ccp4i/Manifest
index e44e9f68b21d..aee590f85cd4 100644
--- a/sci-chemistry/ccp4i/Manifest
+++ b/sci-chemistry/ccp4i/Manifest
@@ -7,13 +7,15 @@ AUX 6.1.3-rename-superpose.patch 655 RMD160 6647dc3e0a021f9809d74d5dd785dd6bde45
 AUX 6.1.3-rename-truncate.patch 810 RMD160 33f8cb14a3bc0f9c6cd249df07f469c9d6601e4d SHA1 ac13f02b6141802e3762efe50a3d270169da0a54 SHA256 5a298cce47726d78ece397affdf1f2d550be520565c7dc5b47a953ab01d23ccd
 DIST 6.1.3-oasis4.0.patch.bz2 946 RMD160 b448376114ba41e6999d533929fdb79812476f87 SHA1 7667aca14d28cec01bfa7d2eee9cbce11624f4fa SHA256 12d7c5965e0c46b0f482514d9083d6be94d65eeb14ba29c17d507d5f9669f84b
 DIST ccp4-6.1.3-core-src.tar.gz 242134076 RMD160 e9b7deb0766fb95d5e8946881f20e086f0896fe9 SHA1 ee5ada892694db5dc9b2d7d2330b4ac694f56580 SHA256 1e529c660e7f390ec0feca9d45caa00a2813d23156c10a2747c427117293c324
+DIST ccp4i-6.1.3-arpwarp.patch.bz2 58498 RMD160 3bf65f26a8635194e69ff9f33a457f9ff7e050d0 SHA1 0172a35d539ed3020228f20f0ddfa82540790cf0 SHA256 297e6f75354f3a1932302f7039bf449484c95eb41b8634ae96d93c754b47c687
+EBUILD ccp4i-6.1.3-r1.ebuild 1972 RMD160 cfdde3786e49998860d7953c53c39efe6492e9e0 SHA1 3b5c0d98f0eaf8472085c28417c0955d5740b496 SHA256 9b1d2b282c7bece5a079fcdc1cbaf06beb755e24d8f3d85adf12dcebf6b12270
 EBUILD ccp4i-6.1.3.ebuild 1896 RMD160 3b8c19bab9c7e4099aad28e24e091d9ee56eeb5e SHA1 d763e0a7a7ebdbc89876a2aff3e6bffdbe2e4c17 SHA256 dffa32057d1dd0d49bebc26a5714e466c450d4d35377e906925e7e37267a0361
-MISC ChangeLog 504 RMD160 b9a8163d39d83a2b5714b84f101d2f674c97c98e SHA1 d88a49981456daaa0b1c513b18cd457a71ef1a94 SHA256 45325a69436e9b2c61572ad0ec9f8f4a8a0519462cd6619df846deaf675b3937
+MISC ChangeLog 646 RMD160 1b43529e7b6c1e04b8e1acd27c87013e40e027e2 SHA1 9cde928df98c6fee4297556d86d1b4d2a64f9e91 SHA256 2ddb8540fa21536f5089d10a0a7d3283f68b5a5a67d9169fd4fe1d98eb4117d0
 MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
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diff --git a/sci-chemistry/ccp4i/ccp4i-6.1.3-r1.ebuild b/sci-chemistry/ccp4i/ccp4i-6.1.3-r1.ebuild
new file mode 100644
index 000000000000..c7f3b5130d54
--- /dev/null
+++ b/sci-chemistry/ccp4i/ccp4i-6.1.3-r1.ebuild
@@ -0,0 +1,82 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ccp4i/ccp4i-6.1.3-r1.ebuild,v 1.1 2010/03/20 17:27:06 jlec Exp $
+
+EAPI="2"
+
+inherit base multilib
+
+MY_PN="${PN%i}"
+MY_P="${MY_PN}-${PV}"
+
+#UPDATE="04_03_09"
+#PATCHDATE="090511"
+
+SRC="ftp://ftp.ccp4.ac.uk/ccp4"
+
+DESCRIPTION="Protein X-ray crystallography toolkit -- graphical interface"
+HOMEPAGE="http://www.ccp4.ac.uk/"
+SRC_URI="
+	${SRC}/${PV}/${MY_P}-core-src.tar.gz
+	mirror://gentoo/${P}-arpwarp.patch.bz2
+	http://dev.gentooexperimental.org/~jlec/distfiles/${PV}-oasis4.0.patch.bz2"
+[[ -n ${UPDATE} ]] && SRC_URI="${SRC_URI} ${SRC}/${PV}/updates/${P}-src-patch-${UPDATE}.tar.gz"
+[[ -n ${PATCHDATE} ]] && SRC_URI="${SRC_URI} http://dev.gentooexperimental.org/~jlec/science-dist/${PV}-${PATCHDATE}-updates.patch.bz2"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+LICENSE="ccp4"
+IUSE=""
+
+RDEPEND="
+	app-shells/tcsh
+	media-gfx/graphviz
+	>=dev-lang/tk-8.3
+	>=dev-tcltk/blt-2.4"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}/${MY_P}"
+
+PATCHES=(
+	"${FILESDIR}"/${PV}-rename-truncate.patch
+	"${FILESDIR}"/${PV}-rename-rapper.patch
+	"${FILESDIR}"/${PV}-rename-superpose.patch
+	"${FILESDIR}"/${PV}-fix-baubles.patch
+	"${WORKDIR}"/${P}-arpwarp.patch
+	)
+
+src_prepare() {
+	base_src_prepare
+
+	[[ ! -z ${PATCHDATE} ]] && epatch "${WORKDIR}"/${PV}-${PATCHDATE}-updates.patch
+
+	epatch "${WORKDIR}"/${PV}-oasis4.0.patch
+}
+
+src_configure() {
+	:
+}
+
+src_compile() {
+	:
+}
+
+src_install() {
+	# rm imosflm stuff
+	rm -rf "${S}"/ccp4i/{bin/imosflm,imosflm}
+
+	rm -rf "${S}"/ccp4i/{bin,etc}/WINDOWS
+
+	# This is installed by mrbump
+	rm -rf "${S}"/ccp4i/{tasks/{dbviewer.tcl,mrbump.*},templates/mrbump.com,scripts/mrbump.script}
+
+	# CCP4Interface - GUI
+	insinto /usr/$(get_libdir)/ccp4
+	doins -r "${S}"/ccp4i || die
+	exeinto /usr/$(get_libdir)/ccp4/ccp4i/bin
+	doexe "${S}"/ccp4i/bin/* || die
+
+	# dbccp4i
+	insinto /usr/share/ccp4
+	doins -r "${S}"/share/dbccp4i || die
+}