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authorOlivier Fisette <ribosome@gentoo.org>2005-02-02 21:10:49 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-02-02 21:10:49 +0000
commit9d99412d3533eec102b933b7873c011f8fb3cb00 (patch)
tree26a0df4d65da04506ac98b2a8e579584f9f073aa /sci-biology
parentstable on ppc64 (diff)
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Fixed possible bug with CFLAGS
Package-Manager: portage-2.0.51-r15
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/clustalx/Manifest2
-rw-r--r--sci-biology/clustalx/clustalx-1.83.ebuild7
2 files changed, 5 insertions, 4 deletions
diff --git a/sci-biology/clustalx/Manifest b/sci-biology/clustalx/Manifest
index 20e664e6e562..5e7f5293970a 100644
--- a/sci-biology/clustalx/Manifest
+++ b/sci-biology/clustalx/Manifest
@@ -1,4 +1,4 @@
MD5 4ed08e0fbd454bc42f6afa59e7aa9e13 ChangeLog 1199
MD5 272b5b012593acd07a7a60b8b64e6761 metadata.xml 509
-MD5 3c5fb24205a08e7983d57bf38054fcb1 clustalx-1.83.ebuild 1339
+MD5 7e1da10ff7433f10e37a8f17fbbcf80f clustalx-1.83.ebuild 1334
MD5 800c4da737d4fb9af3d8ffb7f6f44892 files/digest-clustalx-1.83 68
diff --git a/sci-biology/clustalx/clustalx-1.83.ebuild b/sci-biology/clustalx/clustalx-1.83.ebuild
index 475500cb5abe..57972783cfd0 100644
--- a/sci-biology/clustalx/clustalx-1.83.ebuild
+++ b/sci-biology/clustalx/clustalx-1.83.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-1.83.ebuild,v 1.3 2005/01/30 16:22:51 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-1.83.ebuild,v 1.4 2005/02/02 21:10:49 ribosome Exp $
inherit toolchain-funcs
@@ -23,11 +23,12 @@ src_unpack() {
unpack ${A}
cd ${S}
cp makefile.linux makefile
- sed -i -e "s/CC = cc/CC = $(tc-getCC)/" makefile \
+ sed -e "s/CC = cc/CC = $(tc-getCC)/" \
-e "s/CFLAGS = -c -O/CFLAGS = -c ${CFLAGS}/" \
-e "s/LFLAGS = -O -lm/LFLAGS = -lm ${CFLAGS}/" \
-e "s%-I/usr/bio/src/ncbi/include%-I/usr/include/ncbi%" \
- -e "s%-L/usr/bio/src/ncbi/lib -L/usr/ccs/lib -L/usr/X11R6/lib%-L/usr/lib -L/usr/X11R6/lib%" makefile || die
+ -e "s%-L/usr/bio/src/ncbi/lib -L/usr/ccs/lib -L/usr/X11R6/lib%-L/usr/lib -L/usr/X11R6/lib%" \
+ -i makefile || die
sed -i -e "s%clustalx_help%/usr/share/doc/${PF}/clustalx_help%" clustalx.c || die
sed -i -e "s%clustalw.doc%../clustalw.doc%" clustalx.html || die
}