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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2011-06-20 05:34:50 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2011-06-20 05:34:50 +0000 |
| commit | 0e6ea61c622f58e674ffa5af609ac60b42561001 (patch) | |
| tree | c72df4437e60808f985bf87dabbea411313cfb7f /sci-biology | |
| parent | Allow pidgin be built against net-libs/libgadu[-ssl], bug 372075 thank Bartos... (diff) | |
| download | historical-0e6ea61c622f58e674ffa5af609ac60b42561001.tar.gz historical-0e6ea61c622f58e674ffa5af609ac60b42561001.tar.bz2 historical-0e6ea61c622f58e674ffa5af609ac60b42561001.zip | |
Version bump
Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/allpathslg/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/allpathslg/Manifest | 14 | ||||
| -rw-r--r-- | sci-biology/allpathslg/allpathslg-37578.ebuild | 34 |
3 files changed, 53 insertions, 2 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog index efa135b0eab4..0c707e1f8ea4 100644 --- a/sci-biology/allpathslg/ChangeLog +++ b/sci-biology/allpathslg/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/allpathslg # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.2 2011/01/27 16:23:34 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.3 2011/06/20 05:34:50 weaver Exp $ + +*allpathslg-37578 (20 Jun 2011) + + 20 Jun 2011; Andrey Kislyuk <weaver@gentoo.org> +allpathslg-37578.ebuild: + Version bump *allpathslg-35725-r1 (27 Jan 2011) diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest index e5d420c3dab3..a82fc61d5339 100644 --- a/sci-biology/allpathslg/Manifest +++ b/sci-biology/allpathslg/Manifest @@ -1,4 +1,16 @@ +-----BEGIN PGP SIGNED MESSAGE----- +Hash: SHA1 + DIST allpathslg-35725.tar.gz 2375961 RMD160 b65870041b6b96b81194cf1b9f820c523be29121 SHA1 2a10c88dc2c313a7307a584495195c40640989f8 SHA256 992089f300ea6ae298036f0636a21e4475ac8961927f59c4b78bb2efc2c068ac +DIST allpathslg-37578.tar.gz 2511464 RMD160 462febe6efc690d53feaaff9ffb118a0c7e6a134 SHA1 45ca0d5cee312ff77f2c425b6b615dbec0f4726c SHA256 b4fdb6e7cc523cdb2831562bfabdf640dc2eb89f09d626ffeb4d1de358f46056 EBUILD allpathslg-35725-r1.ebuild 854 RMD160 d654f8c5d2df58883552dae42c16b97f7a056a29 SHA1 1d3f4abaf5bff7afe90d8055b6a27f5e5bf58a3d SHA256 02a9ff15e8357640d58cb1c784ede41a710f67393bae4a5beba02720fdd5ea28 -MISC ChangeLog 597 RMD160 3c6e65bb020f49092a5196d9617b05b403bbc5bc SHA1 bbd44bb38a751a761fa2f94eaace1b1cf3cbbc6c SHA256 80c35e0cd111fd2c1eef66d1ed5b7fc72e0caf944dffa837d2a07e6a26e3ecd9 +EBUILD allpathslg-37578.ebuild 883 RMD160 04c824880b3317e08bf669ebbfb6cd7688dfcfb0 SHA1 8f38c7ae641d00b32cc4ccf4447ac7f39d60dd1d SHA256 fa49af0fe58ba4269ea3009a3df0cdafdd72870fa40e8f7123585eeaf9904702 +MISC ChangeLog 722 RMD160 e4b8840bc4a7e9cf9416bd7e6e58aa5db269b414 SHA1 80aff7b63e62db4bc5b044996916f21441b55f8e SHA256 f5ab652cc338b66f6a0ba57f24324349d031abad970ad13cfc33e4171f27422d MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 +-----BEGIN PGP SIGNATURE----- +Version: GnuPG v1.4.11 (GNU/Linux) + +iEYEARECAAYFAk3+2/8ACgkQ8xSwyhbn2OaLkACgsij1Wm5QCFzslk8EBjFVn0XH +xYMAnREnb2P6fjhhOWfGNamxUaifjvMf +=17nc +-----END PGP SIGNATURE----- diff --git a/sci-biology/allpathslg/allpathslg-37578.ebuild b/sci-biology/allpathslg/allpathslg-37578.ebuild new file mode 100644 index 000000000000..a40b85182f14 --- /dev/null +++ b/sci-biology/allpathslg/allpathslg-37578.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-37578.ebuild,v 1.1 2011/06/20 05:34:50 weaver Exp $ + +EAPI="2" + +inherit autotools + +DESCRIPTION="De novo assembly of whole-genome shotgun microreads" +HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd" +SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz" + +LICENSE="as-is" +SLOT="0" +IUSE="" +KEYWORDS="~amd64" + +DEPEND="dev-libs/boost + >=sys-devel/gcc-4.3.3 + sci-biology/vaal" +RDEPEND="" + +src_prepare() { + filter-ldflags -Wl,--as-needed + eautoreconf +} + +src_install() { + einstall || die + # Provided by sci-biology/vaal + for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do + rm "${D}/usr/bin/$i" || die + done +} |