1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
|
# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
# TODO:
# - add USE flag for remote modules? Those modules can be downloaded
# properly before building.
PYTHON_COMPAT=( python3_{8..10} )
WEBAPP_OPTIONAL=yes
WEBAPP_MANUAL_SLOT=yes
inherit check-reqs cmake cuda flag-o-matic java-pkg-opt-2 python-single-r1 toolchain-funcs virtualx webapp
# Short package version
MY_PV="$(ver_cut 1-2)"
DESCRIPTION="The Visualization Toolkit"
HOMEPAGE="https://www.vtk.org/"
SRC_URI="
https://www.vtk.org/files/release/${MY_PV}/VTK-${PV}.tar.gz
https://www.vtk.org/files/release/${MY_PV}/VTKData-${PV}.tar.gz
doc? ( https://www.vtk.org/files/release/${MY_PV}/vtkDocHtml-${PV}.tar.gz )
examples? ( https://www.vtk.org/files/release/${MY_PV}/VTKLargeData-${PV}.tar.gz )
test? (
https://www.vtk.org/files/release/${MY_PV}/VTKLargeData-${PV}.tar.gz
)
"
S="${WORKDIR}/VTK-${PV}"
LICENSE="BSD LGPL-2"
SLOT="0/${MY_PV}"
KEYWORDS="~amd64 ~arm ~arm64 ~x86 ~amd64-linux ~x86-linux"
# Note: external xdmf2 has no recognized target
IUSE="+X all-modules boost cuda doc examples ffmpeg gdal imaging java
+json kits mpi mysql odbc offscreen openmp pegtl postgres python
qt5 +rendering tbb theora tk video_cards_nvidia views web"
RESTRICT="!test? ( test )"
REQUIRED_USE="
all-modules? ( boost ffmpeg gdal imaging mysql odbc postgres qt5 rendering theora views )
cuda? ( X video_cards_nvidia )
java? ( rendering )
python? ( ${PYTHON_REQUIRED_USE} )
qt5? ( X rendering )
tk? ( X rendering python )
web? ( python )
^^ ( X offscreen )
"
RDEPEND="
app-arch/lz4
app-arch/xz-utils
dev-db/sqlite
dev-cpp/eigen[cuda?,openmp?]
dev-libs/double-conversion:=
dev-libs/expat
dev-libs/icu:=
dev-libs/libxml2:2
dev-libs/pugixml
media-libs/freetype
media-libs/libogg
media-libs/libpng
media-libs/libtheora
media-libs/tiff
<sci-libs/hdf5-1.12:=[mpi=]
sci-libs/kissfft[openmp?]
sci-libs/netcdf:=[mpi=]
sys-libs/zlib
virtual/jpeg
all-modules? ( sci-geosciences/liblas[gdal] )
boost? ( dev-libs/boost:=[mpi?] )
cuda? ( dev-util/nvidia-cuda-toolkit:= )
ffmpeg? ( media-video/ffmpeg:= )
gdal? ( sci-libs/gdal:= )
java? ( >=virtual/jdk-1.8:* )
json? ( dev-libs/jsoncpp:= )
mpi? (
sci-libs/h5part
sys-cluster/openmpi[cxx,romio]
)
mysql? ( dev-db/mariadb-connector-c )
odbc? ( dev-db/unixODBC )
offscreen? ( media-libs/mesa[osmesa] )
postgres? ( dev-db/postgresql:= )
python? ( ${PYTHON_DEPS} )
qt5? (
dev-qt/qtcore:5
dev-qt/qtsql:5
dev-qt/qtwidgets:5
)
rendering? (
media-libs/freeglut
media-libs/glew:=
<sci-libs/proj-8:=
virtual/opengl
x11-libs/gl2ps
)
tbb? ( <dev-cpp/tbb-2021:= )
tk? ( dev-lang/tk:= )
video_cards_nvidia? ( x11-drivers/nvidia-drivers[tools,static-libs] )
views? (
x11-libs/libICE
x11-libs/libXext
)
web? ( ${WEBAPP_DEPEND} )
$(python_gen_cond_dep '
python? (
boost? ( dev-libs/boost:=[mpi?,python?,${PYTHON_USEDEP}] )
gdal? ( sci-libs/gdal:=[python?,${PYTHON_USEDEP}] )
mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
)
')
"
DEPEND="
${RDEPEND}
dev-libs/jsoncpp
dev-libs/utfcpp
pegtl? ( <dev-libs/pegtl-3 )
"
BDEPEND="
mpi? ( app-admin/chrpath )
openmp? (
|| (
sys-devel/gcc[openmp(+)]
sys-devel/clang-runtime[openmp(+)]
)
)
"
PATCHES=(
"${FILESDIR}"/${PN}-9.0.1-0001-fix-kepler-compute_arch-if-CUDA-toolkit-11-is-used.patch
"${FILESDIR}"/${PN}-8.2.0-freetype-2.10.3-provide-FT_CALLBACK_DEF.patch
"${FILESDIR}"/${PN}-9.0.1-limits-include-gcc11.patch
"${FILESDIR}"/${P}-IO-FFMPEG-support-FFmpeg-5.0-API-changes.patch
)
DOCS=( CONTRIBUTING.md README.md )
CHECKREQS_DISK_BUILD="3G"
pkg_pretend() {
if use examples; then
CHECKREQS_DISK_BUILD="4G"
fi
if use cuda; then
# NOTE: This should actually equal to (number of build jobs)*7G,
# as any of the cuda compile tasks can take up 7G!
# 10.2 GiB install directory, 6.4 GiB build directory with max. USE flags
CHECKREQS_MEMORY="7G"
CHECKREQS_DISK_BUILD="14G"
fi
check-reqs_pkg_setup
}
pkg_setup() {
if use examples; then
CHECKREQS_DISK_BUILD="4G"
fi
if use cuda; then
CHECKREQS_MEMORY="7G"
CHECKREQS_DISK_BUILD="14G"
fi
check-reqs_pkg_setup
use java && java-pkg-opt-2_pkg_setup
use python && python-single-r1_pkg_setup
use web && webapp_pkg_setup
}
src_prepare() {
# If we have system libraries available use these and delete
# the respecting files in ${S}/ThirdParty to save some space.
# Note: libharu is omitted: vtk needs an updated version (2.4.0)
# Note: no valid xdmf2 targets are found for system xdmf2
# Note: no valid target found for h5part and mpi4py
# TODO: diy2 exodusII h5part libharu verdict vpic vtkm xdmf2 xdmf3 zfp
local -a DROPS=( doubleconversion eigen expat freetype gl2ps glew
hdf5 jpeg jsoncpp libproj libxml2 lz4 lzma netcdf ogg png pugixml
sqlite theora tiff utf8 zlib )
use pegtl && DROPS+=( pegtl )
local x
for x in ${DROPS[@]}; do
ebegin "Dropping bundled ${x}"
rm -r ThirdParty/${x}/vtk${x} || die
eend $?
done
unset x
if use doc; then
einfo "Removing .md5 files from documents."
rm -f "${WORKDIR}"/html/*.md5 || die "Failed to remove superfluous hashes"
sed -e "s|\${VTK_BINARY_DIR}/Utilities/Doxygen/doc|${WORKDIR}|" \
-i Utilities/Doxygen/CMakeLists.txt || die
fi
cmake_src_prepare
if use cuda; then
cuda_add_sandbox -w
cuda_src_prepare
fi
if use test; then
ebegin "Copying data files to ${BUILD_DIR}"
mkdir -p "${BUILD_DIR}/ExternalData" || die
pushd "${BUILD_DIR}/ExternalData" >/dev/null || die
ln -sf ../../VTK-${PV}/.ExternalData/README.rst . || die
ln -sf ../../VTK-${PV}/.ExternalData/SHA512 . || die
popd >/dev/null || die
eend "$?"
fi
}
src_configure() {
local mycmakeargs=(
# TODO: defaults for some variables to consider as USE flags
# -DVTK_ANDROID_BUILD=OFF
# -DVTK_BUILD_COMPILE_TOOLS_ONLY=OFF
# -DVTK_ENABLE_LOGGING=ON
# -DVTK_ENABLE_REMOTE_MODULES=ON
# -DVTK_INSTALL_SDK=ON
# -DVTK_IOS_BUILD=OFF
# -DVTK_LEGACY_REMOVE=OFF
# -DVTK_LEGACY_SILENT=OFF
# -DVTK_WHEEL_BUILD=OFF
-DVTK_BUILD_ALL_MODULES=$(usex all-modules ON OFF)
# we use the pre-built documentation and install these with USE=doc
-DVTK_BUILD_DOCUMENTATION=OFF
-DVTK_BUILD_EXAMPLES=$(usex examples ON OFF)
-DVTK_ENABLE_KITS=$(usex kits ON OFF)
# default to ON: USE flag for this?
-DVTK_ENABLE_REMOTE_MODULES=OFF
-DVTK_DATA_STORE="${S}/.ExternalData"
# Use upstream default, where USE flags are not given.
# Passing "DONT_WANT" will restrict building of modules from
# those groups and will severly limit the built libraries.
# Exceptions are MPI, where the default is "DONT_WANT" and
# StandAlone using "WANT".
-DVTK_GROUP_ENABLE_Imaging=$(usex imaging "WANT" "DEFAULT")
-DVTK_GROUP_ENABLE_Qt=$(usex qt5 "WANT" "DEFAULT")
-DVTK_GROUP_ENABLE_Rendering=$(usex rendering "WANT" "DEFAULT")
-DVTK_GROUP_ENABLE_StandAlone="WANT"
-DVTK_GROUP_ENABLE_Views=$(usex views "WANT" "DEFAULT")
-DVTK_GROUP_ENABLE_Web=$(usex web "WANT" "DEFAULT")
-DVTK_MODULE_ENABLE_VTK_vtkm="WANT"
-DVTK_MODULE_ENABLE_VTK_AcceleratorsVTKm="WANT"
-DVTK_PYTHON_VERSION="3"
-DVTK_RELOCATABLE_INSTALL=ON
-DVTK_USE_CUDA=$(usex cuda ON OFF)
# use system libraries where possible
-DVTK_USE_EXTERNAL=ON
-DVTK_USE_MPI=$(usex mpi ON OFF)
-DVTK_USE_TK=$(usex tk ON OFF)
-DVTK_USE_X=$(usex X ON OFF)
-DVTK_VERSIONED_INSTALL=ON
-DVTK_WRAP_JAVA=$(usex java ON OFF)
-DVTK_WRAP_PYTHON=$(usex python ON OFF)
)
if use examples || use test; then
mycmakeargs+=( -DVTK_USE_LARGE_DATA=ON )
fi
if ! use java && ! use python; then
# defaults to ON
mycmakeargs+=( -DVTK_ENABLE_WRAPPING=OFF )
fi
if use boost; then
mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_InfovisBoost="WANT"
-DVTK_MODULE_ENABLE_VTK_InfovisBoostGraphAlgorithms="WANT"
)
fi
if use cuda; then
local cuda_arch=
case ${VTK_CUDA_ARCH:-native} in
# we ignore fermi arch, because current nvidia-cuda-toolkit-11*
# no longer supports it
kepler|maxwell|pascal|volta|turing|ampere|all)
cuda_arch=${VTK_CUDA_ARCH}
;;
native)
ewarn "If auto detection fails for you, please try and export the"
ewarn "VTK_CUDA_ARCH environment variable to one of the common arch"
ewarn "names: kepler, maxwell, pascal, volta, turing, ampere or all."
cuda_arch=native
;;
*)
eerror "Please properly set the VTK_CUDA_ARCH environment variable to"
eerror "one of: kepler, maxwell, pascal, volta, turing, ampere, all"
die "Invalid CUDA architecture given: '${VTK_CUDA_ARCH}'!"
;;
esac
ewarn "Using CUDA architecture '${cuda_arch}'"
mycmakeargs+=( -DVTKm_CUDA_Architecture=${cuda_arch} )
fi
if use ffmpeg; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOFFMPEG="WANT" )
fi
if use gdal; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_GeovisGDAL="WANT" )
fi
if use java; then
mycmakeargs+=(
-DCMAKE_INSTALL_JARDIR="share/${PN}"
-DVTK_ENABLE_WRAPPING=ON
)
fi
if use json; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOGeoJSON="WANT" )
fi
if use mpi; then
mycmakeargs+=(
-DVTK_GROUP_ENABLE_MPI="WANT"
-DVTK_MODULE_ENABLE_VTK_IOH5part="WANT"
-DVTK_MODULE_ENABLE_VTK_IOParallel="WANT"
-DVTK_MODULE_ENABLE_VTK_IOParallelNetCDF="WANT"
-DVTK_MODULE_ENABLE_VTK_IOParallelXML="WANT"
-DVTK_MODULE_ENABLE_VTK_ParallelMPI="WANT"
-DVTK_MODULE_ENABLE_VTK_RenderingParallel="WANT"
-DVTK_MODULE_ENABLE_VTK_h5part="WANT"
-DVTKm_ENABLE_MPI=ON
)
if use python; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_ParallelMPI4Py="WANT" )
fi
fi
if use mysql; then
mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_IOMySQL="WANT"
-DVTK_MODULE_ENABLE_VTK_IOSQL="WANT"
)
fi
if use odbc; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOODBC="WANT" )
fi
if use offscreen; then
mycmakeargs+=(
-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=ON
-DVTK_DEFAULT_RENDER_WINDOW_HEADLESS=ON
-DVTK_OPENGL_HAS_OSMESA=ON
)
fi
if use openmp; then
if use tbb; then
einfo "NOTE: You have specified both openmp and tbb USE flags."
einfo "NOTE: Tbb will take precedence. Disabling OpenMP"
# Sequential is default SMP implementation, nothing special to do
else
mycmakeargs+=(
-DVTK_SMP_IMPLEMENTATION_TYPE="OpenMP"
-DVTKm_ENABLE_OPENMP=ON
)
fi
fi
if use pegtl; then
mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_pegtl=ON )
else
mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_pegtl=OFF )
fi
if use postgres; then
mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_IOPostgreSQL="WANT"
-DVTK_MODULE_ENABLE_VTK_IOSQL="WANT"
)
fi
if use python; then
mycmakeargs+=(
-DVTK_ENABLE_WRAPPING=ON
-DPython3_EXECUTABLE="${PYTHON}"
-DVTK_PYTHON_SITE_PACKAGES_SUFFIX="lib/${EPYTHON}/site-packages"
)
fi
if use qt5; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_GUISupportQt="WANT" )
if use mysql || use postgres; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_GUISupportQtSQL="WANT" )
fi
if use rendering; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_RenderingQt="WANT" )
fi
if use views; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_ViewsQt="WANT" )
fi
fi
if use rendering || use web || use all-modules; then
# needs patched version
mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_libharu=OFF )
fi
if use rendering; then
mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_IOExportGL2PS="WANT"
-DVTK_MODULE_USE_EXTERNAL_VTK_gl2ps=ON
-DVTK_MODULE_USE_EXTERNAL_VTK_glew=ON
-DVTK_MODULE_USE_EXTERNAL_VTK_libproj=ON
)
fi
if use tbb; then
mycmakeargs+=(
-DVTK_SMP_IMPLEMENTATION_TYPE="TBB"
-DVTKm_ENABLE_TBB=ON
)
fi
if use test; then
ewarn "Testing requires VTK_FORBID_DOWNLOADS=OFF by upstream."
ewarn "Care has been taken to pre-download all required files."
ewarn "In case you find missing files, please inform me."
mycmakeargs+=(
-DVTK_BUILD_TESTING=ON
-DVTK_DATA_EXCLUDE_FROM_ALL=ON
-DVTK_FORBID_DOWNLOADS=OFF
)
else
mycmakeargs+=(
-DVTK_BUILD_TESTING=OFF
-DVTK_FORBID_DOWNLOADS=ON
)
fi
if use theora; then
mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOOggTheora="WANT" )
fi
if use all-modules; then
mycmakeargs+=(
-DVTK_ENABLE_OSPRAY=OFF
-DVTK_MODULE_ENABLE_VTK_DomainsMicroscopy="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_FiltersOpenTURNS="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_IOADIOS2="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_IOPDAL="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_MomentInvariants="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_PoissonReconstruction="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_Powercrust="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_RenderingOpenVR="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_SignedTensor="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_SplineDrivenImageSlicer="DONT_WANT"
-DVTK_MODULE_ENABLE_VTK_vtkDICOM="DONT_WANT"
-DVTK_MODULE_USE_EXTERNAL_vtkkissfft=ON
)
fi
use java && export JAVA_HOME="${EPREFIX}/etc/java-config-2/current-system-vm"
if use mpi; then
export CC=mpicc
export CXX=mpicxx
export FC=mpif90
export F90=mpif90
export F77=mpif77
fi
cmake_src_configure
}
src_test() {
nonfatal virtx cmake_src_test
}
src_install() {
use web && webapp_src_preinst
# Stop web page images from being compressed
if use doc; then
HTML_DOCS=( "${WORKDIR}/html/." )
fi
cmake_src_install
use java && java-pkg_regjar "${ED}"/usr/share/${PN}/${PN}.jar
# install examples
if use examples; then
einfo "Installing examples"
mv -v {E,e}xamples || die
dodoc -r examples
docompress -x /usr/share/doc/${PF}/examples
einfo "Installing datafiles"
insinto /usr/share/${PN}/data
doins -r "${S}/.ExternalData"
fi
# with MPI runpath's are not deleted properly
if use mpi; then
chrpath -d "${ED}"/usr/$(get_libdir)/*.so.${PV} || die
fi
use python && python_optimize
# environment
cat >> "${T}"/40${PN} <<- EOF || die
VTK_DATA_ROOT=${EPREFIX}/usr/share/${PN}/data
VTK_DIR=${EPREFIX}/usr/$(get_libdir)/${PN}
VTKHOME=${EPREFIX}/usr
EOF
doenvd "${T}"/40${PN}
use web && webapp_src_install
# Temporary!
# Avoid collision with paraview.
# bug #793221
rm -rf "${ED}"/usr/share/vtkm-1.5/VTKm{LICENSE.txt,README.md} || die
}
# webapp.eclass exports these but we want it optional #534036
pkg_postinst() {
use web && webapp_pkg_postinst
if use examples; then
einfo "You can get more and updated examples at"
einfo "https://kitware.github.io/vtk-examples/site/"
fi
}
pkg_prerm() {
use web && webapp_pkg_prerm
}
|