diff options
Diffstat (limited to 'sci-chemistry/dssp')
| -rw-r--r-- | sci-chemistry/dssp/Manifest | 2 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-4.3.1.ebuild | 39 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-4.4.1.ebuild | 54 |
3 files changed, 0 insertions, 95 deletions
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index 8388d09b6c61..34adeb159346 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -1,6 +1,4 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1bc820a0df0db6a5f78ac0229aafdd47a60b8fd6f4832abf0399663c53f9e898c75f08ecbe22b141c8da SHA512 4a273714d6b3230daea166caa7f4117d5ccb225bea0cf1bc2eb61539b6cc8e227d0ba19047d61f0ad0d1d6bc2efdec9c193bd44341e15ef0950acb4a22498811 DIST dssp-3.0.11.tar.gz 168085 BLAKE2B e1c42fd22cfb2287f10b5deae48b56a4583d4a67737a3485dcbd160d1597a15c2d5105c3794c875d8001abede1c014efb4f7f5b7c250f867bdf9ed95a0860217 SHA512 a0cfe44e517ff1f909ef2928b62ae2c639c6bddfd8a0fb538883f647fd2771e00da68e0fd2521aa02ba3c6d1b0c9b784b7fe142392af3a3abf6ea89f1546bd9d -DIST dssp-4.3.1.tar.gz 226842 BLAKE2B 86318f05b8381d94fa9c65a956f5fb607ef8072b0395d912e20697ba36836c449ddff31a4a64d0005bbfe34899f71853c0f15a911042389fc894934c08fc34c8 SHA512 4dc1a3f5c7ba258ebf548674c7b33c36b0e3a7d14911394eb8d2955c235f3cb1d6c50cb03f411db55a8a9d7aa93e4d03354c47f9f0126b0bdcbf40dc9391d403 -DIST dssp-4.4.1.tar.gz 161797 BLAKE2B d6bfb40a730f39e9d5a0988ce22a9dd377ec08a09e29f77e5afaac26d512cf87f6e289c1e4e3e63cfef7354b10fb57bf410bcc169604b1b6a6078380e4f08d26 SHA512 1bcf9e16efc5d3a7de11e24ed63e47d3263123af4670b8f3daa97cdf7cc33202fb4d564acac3024ed4edcce1ef8278f71f5312f27a234d2957afa6f563c88ed6 DIST dssp-4.4.4.1.tar.gz 162809 BLAKE2B 6c3f588a48778cf5f20b40b93736e150a4d366bf44d214b4064362c2a3bce69db415f5d12568a8523d99e2e5a47749d450ff0251dc3035628dbef9343d37e99a SHA512 291810391d74da7ab65bcf4aab61fa4ae1a5518a361fa02d5c15ed0e5c94139fde65e7612a978f5326bd7d93f2ac6ea01b2b65514d6b64f4d062adf112c48deb DIST dssp-4.4.7.tar.gz 163831 BLAKE2B 195c8fb183df00105098967850b01c0d6acf776f7cfa409fc536c8291e7a467da2adfb5f34d8191e33dbb29bfd254cd414c1b7b76ed3f3b854928c4dc8a5fcdd SHA512 2fe2d8a494b570934c0d28804fe69b6569089ded58ec92bf3d83b25ce60a3b9486490909e187b511328f13498ca9027869e922d95a355cf0e21c2564c2db1b5a diff --git a/sci-chemistry/dssp/dssp-4.3.1.ebuild b/sci-chemistry/dssp/dssp-4.3.1.ebuild deleted file mode 100644 index daf7c4f9314d..000000000000 --- a/sci-chemistry/dssp/dssp-4.3.1.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 -inherit cmake - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" -SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -BDEPEND=" - dev-libs/boost:=[zlib] - >=dev-libs/libmcfp-1.2.2 - >=sci-libs/libcifpp-5.1.0 -" -DEPEND="" -RDEPEND="${BDEPEND}" - -src_configure() { - # gxrio not packaged - local mycmakeargs=( - -DBUILD_WEBSERVER=OFF - ) - cmake_src_configure -} - -pkg_postinst() { - if has_version "<=sci-chemistry/gromacs-2022"; then - ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" - ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" - ewarn - ewarn "Feel free to mask newer versions if needed." - fi -} diff --git a/sci-chemistry/dssp/dssp-4.4.1.ebuild b/sci-chemistry/dssp/dssp-4.4.1.ebuild deleted file mode 100644 index d79883c4e211..000000000000 --- a/sci-chemistry/dssp/dssp-4.4.1.ebuild +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 -inherit cmake - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" -SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -# doc disabled as it only generates a PDF from the manpage for now -# https://github.com/PDB-REDO/dssp/issues/64 -#IUSE="doc" - -CDEPEND=" - dev-libs/boost:=[zlib] - >=dev-libs/libmcfp-1.2.2 - >=sci-libs/libcifpp-5.1.0 -" -BDEPEND="${CDEPEND}" -# doc? ( -# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc ) -# dev-python/weasyprint -# ) -DEPEND="" -RDEPEND="${CDEPEND}" - -#src_prepare() { -# # wkhtmltopdf is not available on Gentoo -# sed -i -e \ -# 's/-t html/-t html --pdf-engine=weasyprint/' \ -# CMakeLists.txt -# cmake_src_prepare -#} - -src_configure() { - local mycmakeargs=( - #-DGENERATE_DOCUMENTATION=$(usex doc) - -DGENERATE_DOCUMENTATION=NO - ) - cmake_src_configure -} - -pkg_postinst() { - if has_version "<=sci-chemistry/gromacs-2022"; then - ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" - ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" - ewarn - ewarn "Feel free to mask newer versions if needed." - fi -} |