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authorDavid Seifert <soap@gentoo.org>2022-06-19 10:08:46 +0200
committerDavid Seifert <soap@gentoo.org>2022-06-19 10:08:46 +0200
commitb1d57c4d6a1a0838f716fadedb0160fc8e08dc55 (patch)
treec164621fff664d703a061b1e44ed00930bede6b5 /sci-libs/htslib
parentsci-biology/samtools: drop 1.13, 1.15 (diff)
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sci-libs/htslib: drop 1.13, 1.15
Closes: https://github.com/gentoo/gentoo/pull/25964 Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-libs/htslib')
-rw-r--r--sci-libs/htslib/Manifest2
-rw-r--r--sci-libs/htslib/htslib-1.13.ebuild52
-rw-r--r--sci-libs/htslib/htslib-1.15.ebuild52
3 files changed, 0 insertions, 106 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest
index 4e08554f1289..f5b37a27ae5a 100644
--- a/sci-libs/htslib/Manifest
+++ b/sci-libs/htslib/Manifest
@@ -1,3 +1 @@
-DIST htslib-1.13.tar.bz2 4226834 BLAKE2B ae1f64e564f0f7bea80ea9d276b5d5b2b04fa3c8bd58f2c68966225b4324962f34d8a26b74267ab90dc530dfced1b9c01702d25918fd7a7c74e13913f00d5007 SHA512 16a3d61c115b71406bc4411a0c1176909166b52c4f7bb11614e398df4defaec4d09763413053e4d0d5916921c866d20019096d8fed866e77f9f1cafbd1e95b16
DIST htslib-1.15.1.tar.bz2 4141140 BLAKE2B 312f67c8916586199b32b7703b43a9fd365b8af22802bf4d63fc40960c62b956915e7c60bbd777a8b179066608cd3a281929a10b60eef21d6eedb4caf8c147c1 SHA512 69d0c7f3ac50a9b9c579e9b3479b6745fc30d0ac838ff14695cf4e3da593854350e345ed1f4a496931ef57395f3416da4316903488f3e641f1e00fec544f3620
-DIST htslib-1.15.tar.bz2 4141168 BLAKE2B 20462b01e065b65de2b7df883cf61f9beb9ccca6fa3dc159c0aa7b303daf7c3779938f5eadbd3320e85ec19de105dc55e238c47a922ff6ace6fcaea2b0e95c19 SHA512 b87ce3eaa63a731d812953129f1c9aa857fe896ea9e924b7eb92173d8e624dd45e5582b3a97e7120ff7fe339e4d40148077424029626f50372b3f164093aa6cc
diff --git a/sci-libs/htslib/htslib-1.13.ebuild b/sci-libs/htslib/htslib-1.13.ebuild
deleted file mode 100644
index cfd9cfb3263e..000000000000
--- a/sci-libs/htslib/htslib-1.13.ebuild
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-inherit toolchain-funcs
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-LICENSE="MIT"
-SLOT="0/3"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="+bzip2 curl +lzma"
-
-RDEPEND="
- sys-libs/zlib
- bzip2? ( app-arch/bzip2 )
- curl? ( net-misc/curl )
- lzma? ( app-arch/xz-utils )"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- default
-
- # upstream injects LDFLAGS into the .pc file,
- # which is a big nono for QA
- sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \
- -i htslib.pc.in || die
-}
-
-src_configure() {
- econf \
- --disable-gcs \
- --disable-plugins \
- --disable-s3 \
- $(use_enable bzip2 bz2) \
- $(use_enable curl libcurl) \
- $(use_enable lzma)
-}
-
-src_compile() {
- emake AR="$(tc-getAR)"
-}
-
-src_install() {
- default
-
- # doesn't use libtool, can't disable static libraries
- find "${ED}" -name '*.a' -delete || die
-}
diff --git a/sci-libs/htslib/htslib-1.15.ebuild b/sci-libs/htslib/htslib-1.15.ebuild
deleted file mode 100644
index e651576d8a81..000000000000
--- a/sci-libs/htslib/htslib-1.15.ebuild
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-inherit toolchain-funcs
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-LICENSE="MIT"
-SLOT="0/3"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="+bzip2 curl +lzma"
-
-RDEPEND="
- sys-libs/zlib
- bzip2? ( app-arch/bzip2 )
- curl? ( net-misc/curl )
- lzma? ( app-arch/xz-utils )"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- default
-
- # upstream injects LDFLAGS into the .pc file,
- # which is a big nono for QA
- sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \
- -i htslib.pc.in || die
-}
-
-src_configure() {
- econf \
- --disable-gcs \
- --disable-plugins \
- --disable-s3 \
- $(use_enable bzip2 bz2) \
- $(use_enable curl libcurl) \
- $(use_enable lzma)
-}
-
-src_compile() {
- emake AR="$(tc-getAR)"
-}
-
-src_install() {
- default
-
- # doesn't use libtool, can't disable static libraries
- find "${ED}" -name '*.a' -delete || die
-}