blob: d710840cabf3a0631de44874d1dea079dd050dbb (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
|
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
inherit versionator toolchain-funcs
MY_PV=$(replace_all_version_separators '-')
MY_P="${PN}-${MY_PV}"
DESCRIPTION="Cis-eLement OVERrepresentation: Detection of functional DNA motifs"
HOMEPAGE="http://zlab.bu.edu/clover/"
SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${MY_P}.tar.gz
http://zlab.bu.edu/clover/jaspar2005core"
LICENSE="as-is"
SLOT="0"
IUSE=""
KEYWORDS="~x86"
DEPEND=""
RDEPEND=""
S="${WORKDIR}/${MY_P}"
src_unpack() {
unpack ${MY_P}.tar.gz
sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed"
}
src_compile() {
emake || die "emake failed"
}
src_install() {
dobin clover
insinto /usr/share/${PN}
doins "${DISTDIR}"/jaspar2005core || die "doins failed"
}
pkg_postinst() {
elog "The motif library jaspar2005core has been installed in"
elog " /usr/share/clover/jaspar2005core"
elog "You can pass this library to clover for motif search, or use your own library."
}
|
GitWeb
