config/simple-deprules.d/sci


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#deptype sys

# == geo ==
~sci-geosciences/gmt {
	gmt$
}
~sci-geosciences/grass :: grass

# == math ==

~sci-mathematics/glpk {
	glpk
}

~sci-mathematics/jags :: jags

# lowest octave version in portage is 3.4
sci-mathematics/octave {
	Octave
}

# lowest version in portage is 2.3.4-r1
sci-mathematics/pari {
	pari/gp
}

sci-mathematics/singular {
	Singular
}

~sci-mathematics/yacas :: yacas
sci-mathematics/yacas {
	yacas
}

sci-mathematics/octave {
	Octave
}

sci-libs/netcdf {
	NetCDF4
}

# there's also sci-biology/clustalw-mpi
#
sci-biology/clustalw {
	clustalw
}

sci-biology/ncbi-tools++ {
	ncbi-blast\+
	ncbi-tools\+\+
}

sci-biology/kalign {
	kalign
}

sci-mathematics/glpk {
	libglpk-dev
}

#deptype all

# some packages have glpk in "pkg" deps
# FIXME: does glpk in that context refer to an R package?
~sci-mathematics/glpk {
	glpk
}

#deptype pkg
sci-mathematics/rstudio {
	manipulate
}

#deptype sys

# == misc ==

# FIXME: correct?
~sci-misc/netlogo-bin :: NetLogo

# == physics ==

# lowest sci-physics/root version in portage is 5.32.03
sci-physics/root {
	root_v5.32.01
}

# == visualization ==

~sci-visualization/ggobi :: ggobi

sci-biology/merlin :: MERLIN

sci-visualization/gnuplot {
	gnuplot
}