FAH cleanup

svn path=/; revision=307

7 files changed, 0 insertions, 395 deletions

diff --git a/sci-biology/foldingathome/ChangeLog b/sci-biology/foldingathome/ChangeLog
deleted file mode 100644
index 71026fc..0000000
--- a/sci-biology/foldingathome/ChangeLog
+++ /dev/null
@@ -1,246 +0,0 @@
-# ChangeLog for sci-biology/foldingathome
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/ChangeLog,v 1.30 2010/06/24 11:47:44 jlec Exp $
-
-  24 Jun 2010; Justin Lecher <jlec@gentoo.org>
-  -foldingathome-5.0.2-r3.ebuild:
-  Cleaned uneeded version
-
-  22 Jun 2010; Justin Lecher <jlec@gentoo.org> foldingathome-6.29.ebuild:
-  Dropping ~x86 as upstream only provides 64bit for this version, 324611
-
-
-*foldingathome-6.29 (17 Jun 2010)
-
-  17 Jun 2010; Justin Lecher <jlec@gentoo.org> +files/6.29/fah-init,
-  +files/6.29/folding-conf.d, +files/6.29/initfolding,
-  +foldingathome-6.29.ebuild:
-  Version Bump, 270458, fixes for prestripped files. #252033
-
-  30 Nov 2008; Jeff Gardner <je_fro@gentoo.org> files/6.02/folding-conf.d:
-  Removing smp from default opts to hopefully fix bug #248896
-  Thanks to Vladimir Berezhnoy.
-
-  22 Nov 2008; Jeff Gardner <je_fro@gentoo.org>
-  foldingathome-6.02-r1.ebuild:
-  Add shameless plug for my folding group.
-
-*foldingathome-6.02-r1 (22 Nov 2008)
-
-  22 Nov 2008; Jeff Gardner <je_fro@gentoo.org> -foldingathome-6.02.ebuild,
-  +foldingathome-6.02-r1.ebuild:
-  Bumping for init script fix and add back ~x86.
-
-  22 Nov 2008; Jeff Gardner <je_fro@gentoo.org> files/6.02/fah-init:
-  Changing to use init script from Constantin Baranov on bug #218331
-
-  03 Aug 2008; Jeff Gardner <je_fro@gentoo.org> -files/6.02_beta1/fah-init,
-  -files/6.02_beta1/folding-conf.d, -files/6.02_beta1/initfolding,
-  -foldingathome-6.02_beta1.ebuild:
-  remove dead beta
-
-*foldingathome-6.02 (03 Aug 2008)
-
-  03 Aug 2008; Jeff Gardner <je_fro@gentoo.org> +files/6.02/fah-init,
-  +files/6.02/folding-conf.d, +files/6.02/initfolding,
-  +foldingathome-6.02.ebuild:
-  Latest version, thanks to Nicolas Schlumberger, closes bug #233751
-
-  15 Jun 2008; Jeff Gardner <je_fro@gentoo.org>
-  files/6.02_beta1/folding-conf.d:
-  Add smp option thanks to Timon Van Overveldt in bug #194423
-
-*foldingathome-6.02_beta1 (14 Jun 2008)
-
-  14 Jun 2008; Jeff Gardner <je_fro@gentoo.org> -files/5.91_beta/fah-init,
-  -files/5.91_beta/initfolding, -files/5.91_beta/folding-conf.d,
-  +files/6.02_beta1/fah-init, +files/6.02_beta1/folding-conf.d,
-  +files/6.02_beta1/initfolding, -foldingathome-5.91_beta.ebuild,
-  +foldingathome-6.02_beta1.ebuild:
-  Latest beta client
-
-  12 Jul 2007; Christoph Mende <angelos@gentoo.org>
-  foldingathome-5.0.2-r5.ebuild:
-  Stable on amd64 wrt bug #164823
-
-  12 Jul 2007; Christian Faulhammer <opfer@gentoo.org>
-  foldingathome-5.0.2-r5.ebuild:
-  stable x86, bug 164823
-
-  03 Jul 2007; Jeff Gardner <je_fro@gentoo.org>
-  foldingathome-5.91_beta.ebuild:
-  foldingathome-5.91_beta has expired. Removing KEYWORDS until the next
-  release arrives.
-
-  02 Jul 2007; Piotr Jaroszyński <peper@gentoo.org>
-  foldingathome-5.0.2-r3.ebuild, foldingathome-5.0.2-r5.ebuild:
-  (QA) RESTRICT clean up.
-
-  21 Apr 2007; Jeff Gardner <je_fro@gentoo.org>
-  foldingathome-5.0.2-r3.ebuild, foldingathome-5.0.2-r5.ebuild:
-  Use newconfd wrt bug #174266
-
-  11 Apr 2007; Jeff Gardner <je_fro@gentoo.org>
-  foldingathome-5.91_beta.ebuild:
-  Fixed to better install files under /etc.
-
-*foldingathome-5.91_beta (10 Apr 2007)
-
-  10 Apr 2007; Jeff Gardner <je_fro@gentoo.org> +files/5.91_beta/fah-init,
-  +files/5.91_beta/folding-conf.d, +files/5.91_beta/initfolding,
-  +foldingathome-5.91_beta.ebuild:
-  Adding the amd64-smp client for testing. Thanks to John Gibson.
-
-  03 Nov 2006; Olivier Fisette <ribosome@gentoo.org> -files/init-5.0.2-r4,
-  -foldingathome-5.0.2-r4.ebuild:
-  Pruned old version.
-
-*foldingathome-5.0.2-r5 (16 Jun 2006)
-
-  16 Jun 2006; Patrick Kursawe <phosphan@gentoo.org> +files/init-5.0.2-r5,
-  +foldingathome-5.0.2-r5.ebuild:
-  Adding --chdir to start-stop-daemon because of bug #109707
-
-*foldingathome-5.0.2-r4 (14 Aug 2005)
-
-  14 Aug 2005; Olivier Fisette <ribosome@gentoo.org> +files/init-5.0.2-r4,
-  +foldingathome-5.0.2-r4.ebuild:
-  Fixed bug #95697: license is now correct and the binaries are no longer
-  stripped since we are not allowed to modify them. Thanks to Ian Kelly
-  <kellyia@udel.edu>. Fixed bugs #90247 and #93047: Foldingathome init script
-  now uses start-stop-daemon. Thanks to James Lademann
-  <jwlademann@myrealbox.com>.
-
-  22 Apr 2005; Danny van Dyk <kugelfang@gentoo.org>
-  foldingathome-5.0.2-r3.ebuild:
-  Marked stable on amd64.
-
-  03 Mar 2005; Brandon Low <lostlogic@gentoo.org> -files/folding-conf.d,
-  -files/folding-init.d, -files/folding-init.d-r1, -files/folding-init.d-r3,
-  -files/folding.sh, files/init-5.0.2-r3, -files/initfolding,
-  -files/initfolding-r1, -foldingathome-4.0.0-r2.ebuild,
-  -foldingathome-4.0.0.ebuild:
-  Fix bug 82345, nice 20 doesn't exist.
-  Remove old ebuilds and files.
-
-  08 Feb 2005; Brandon Low <lostlogic@gentoo.org>
-  foldingathome-5.0.2-r3.ebuild:
-  Mark stable on x86
-
-  05 Feb 2005; Brandon Low <lostlogic@gentoo.org> -files/copy_client_config,
-  -files/folding-init.d-r2, -files/folding-init.d-r4, -files/init-5.0.2-r1,
-  -files/init-5.0.2-r2, -foldingathome-5.0.2-r1.ebuild,
-  -foldingathome-5.0.2-r2.ebuild, -foldingathome-5.0.2.ebuild:
-  Clean up some cruft
-
-*foldingathome-5.0.2-r3 (05 Feb 2005)
-
-  05 Feb 2005; Brandon Low <lostlogic@gentoo.org> +files/init-5.0.2-r3,
-  +foldingathome-5.0.2-r3.ebuild:
-  Fix bug #80778
-
-*foldingathome-5.0.2-r2 (04 Feb 2005)
-
-  04 Feb 2005; Brandon Low <lostlogic@gentoo.org> +files/init-5.0.2-r2,
-  +foldingathome-5.0.2-r2.ebuild:
-  Fix bug #79574. Add unitinfo target to initscript to get the status of each
-  core on the system. Thanks to Yosef Meller <yosefm@gmail.com> for the idea
-  and initial patch
-
-*foldingathome-5.0.2-r1 (03 Feb 2005)
-
-  03 Feb 2005; Brandon Low <lostlogic@gentoo.org>
-  +files/copy_client_config-5.0.2-r1, +files/init-5.0.2-r1,
-  +foldingathome-5.0.2-r1.ebuild:
-  Fix bug 71700 hopefully. Use bash not python for copy_client_config. Update
-  the init script to do more sane things and not fail to stop on multi-cpu
-  systems.
-
-*foldingathome-4.0.0-r2 (23 Dec 2004)
-
-  23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
-  +files/copy_client_config, +files/folding-conf.d, +files/folding-conf.d-r1,
-  +files/folding-init.d, +files/folding-init.d-r1, +files/folding-init.d-r2,
-  +files/folding-init.d-r3, +files/folding-init.d-r4, +files/folding.sh,
-  +files/initfolding, +files/initfolding-r1, +files/initfolding-r2,
-  +foldingathome-4.0.0-r2.ebuild, +foldingathome-4.0.0.ebuild,
-  +foldingathome-5.0.2.ebuild:
-  Moved from app-sci/foldingathome to sci-biology/foldingathome.
-
-  13 Dec 2004; Patrick Kursawe <phosphan@gentoo.org>
-  -foldingathome-4.0.0-r1.ebuild:
-  Cleanup
-
-*foldingathome-5.0.2 (09 Nov 2004)
-
-  09 Nov 2004; Steve Arnold <nerdboy@gentoo.org> +files/copy_client_config,
-  +files/folding-conf.d-r1, +files/folding-init.d-r4, +files/initfolding-r2,
-  +foldingathome-5.0.2.ebuild:
-  bumped to current version (bug 60318) with ebuild from Gregory P. Smith
-  <greg-gentoo@electricrain.com>.  Gentoo team config.
-
-  12 Jun 2004; Danny van Dyk <kugelfang@gentoo.org>
-  foldingathome-4.0.0-r2.ebuild:
-  Marked ~amd64.
-
-*foldingathome-4.0.0-r2 (07 Jun 2004)
-
-  07 Jun 2004; Patrick Kursawe <phosphan@gentoo.org>
-  foldingathome-3.24-r1.ebuild, foldingathome-3.24.ebuild,
-  foldingathome-4.0.0-r2.ebuild, files/folding-init.d-r3:
-  No longer redirecting output to a redundand log file, see bug #51489
-  Cleanup, removing 3.x versions.
-
-  23 Apr 2004; David Holm <dholm@gentoo.org> foldingathome-4.0.0-r1.ebuild:
-  Added to ~ppc.
-
-*foldingathome-4.0.0-r1 (22 Apr 2004)
-
-  22 Apr 2004; Patrick Kursawe <phosphan@gentoo.org>
-  foldingathome-4.0.0-r1.ebuild, files/folding-conf.d,
-  files/folding-init.d-r2, files/initfolding-r1:
-  Added support to run multiple clients for those with multiprocessors
-  and the ability to pass options to the Folding clients.
-  Based on bug #47526 (by Mike Caley <mjcaley@darkarctic.com>)
-
-  26 Mar 2004; Patrick Kursawe <phosphan@gentoo.org>
-  foldingathome-3.14.ebuild, foldingathome-3.24-r1.ebuild,
-  foldingathome-3.24.ebuild, foldingathome-4.0.0.ebuild:
-  Setting IUSE, removing S= where not necessary, declaring 4.0.0 stable for x86
-
-  09 Mar 2004; Daniel Ahlberg <aliz@gentoo.org> foldingathome-4.0.0.ebuild:
-  Adding amd64 keyword. Closing #43779.
-
-*foldingathome-4.0.0 (03 Mar 2004)
-
-  03 Mar 2004; Patrick Kursawe <phosphan@gentoo.org>
-  foldingathome-4.0.0.ebuild:
-  Version bump inspired by bug #34859
-
-*foldingathome-3.24-r1 (01 Mar 2004)
-
-  01 Mar 2004; Patrick Kursawe <phosphan@gentoo.org>
-  foldingathome-3.24-r1.ebuild, files/folding-init.d-r1, files/folding.sh,
-  files/initfolding:
-  Running as seperate user now.
-
-  05 May 2003; Daniel Ahlberg <aliz@gentoo.org> files/folding-init.d :
-  Fixed stop() in init script. Fix by 
-  Roderick van Domburg <r.s.a.vandomburg@student.utwente.nl> in #20327.
-
-  23 Apr 2003; Daniel Ahlberg <aliz@gentoo.org> foldingathome-3.2.4.ebuild, files/folding-init.d :
-  Now has the version number in SRC_URI and also uses the newer client if we're running >=glibc-2.3.0. 
-  Also updated init script. Closes #19709 and #17715.
-
-*foldingathome-3.24 (27 Feb 2003)
-
-  27 Feb 2003; Daniel Ahlberg <aliz@gentoo.org> foldingathome-3.24.ebuild :
-  Version bump.
-
-  27 Feb 2003; Daniel Ahlberg <aliz@gentoo.org> files/folding-init.d :
-  Start the daemon with nice, closes #12950.
-  
-*foldingathome-3.14 (04 Nov 2002)
-
-  04 Nov 2002; Daniel Ahlberg <aliz@gentoo.org> :
-  Initial import. Ebuild contributed by Ryan Shaw <ryan.shaw@stanfordalumni.org> in #9535.
diff --git a/sci-biology/foldingathome/Manifest b/sci-biology/foldingathome/Manifest
deleted file mode 100644
index 0b1ec02..0000000
--- a/sci-biology/foldingathome/Manifest
+++ /dev/null
@@ -1,7 +0,0 @@
-AUX 999/fah-init 701 RMD160 390f388e179d5d40e9e6b6c09feda0d612a0b1b0 SHA1 24653bface4949ca0a722118fb86328ad98fd143 SHA256 6ae46bb799b3fe73a0db397eb458a0b827d724d5da2d14bcbeb15881691e521f
-AUX 999/folding-conf.d 855 RMD160 fdcaa327b7b95c9c2e14b9ffd57d02d9a090d0ad SHA1 494ba9f6cc6fc171dc087851e25d95973080de19 SHA256 820a75fb733d06143ed87ad3c1a72f981f440c4ea5904c7c48c0da414788e2f7
-AUX 999/initfolding 129 RMD160 54291b21086999899b4a3706527efb75b0ab4683 SHA1 16705be6fb8cc4078ae84d2dace88426718ba0df SHA256 68cc48a8bd068d10204d2a74d8717baa62ba50567ab2a89c2f27fc27de635c4c
-DIST fah6_alt 312024 RMD160 b9e06ce2961f53aea0695628e04f482c831a34cd SHA1 3481e1a242b18a9a67a5fa4fa3cbcf30d3e1af45 SHA256 db61af58c2b0987244720d1ef5eabb397f182a0be3dee543449492f0457e4574
-EBUILD foldingathome-999.ebuild 1767 RMD160 b55fdb53a73c7987f4baa320af317b8219549cda SHA1 425a77f67719dd74541fc96ac9ae7498bc42525d SHA256 a1b5d3d67383c96d8a6be82fe356801d4f763fc44394413a6c9aad916d791dee
-MISC ChangeLog 9477 RMD160 ede14b11a236de115dee926031a4485b6ca69eed SHA1 a0784b391215455b5498a8477ae3f6253e8f4353 SHA256 52b6b66d1a017eb05eb97debc3df90200c3ffa3e3d7e4ac547704f97166e4a31
-MISC metadata.xml 424 RMD160 18ef625a4315017ead1428c69f1628be0e05a3e3 SHA1 e74c4608795112735b11b3f9053d82e1e351d7ab SHA256 30b75cafd9fda04b994ab9eb0d77c44135479d3373fc0b899b9bde7efebfed12
diff --git a/sci-biology/foldingathome/files/999/fah-init b/sci-biology/foldingathome/files/999/fah-init
deleted file mode 100644
index 458fc7b..0000000
--- a/sci-biology/foldingathome/files/999/fah-init
+++ /dev/null
@@ -1,33 +0,0 @@
-#!/sbin/runscript
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $
-
-opts="${opts} unitinfo"
-
-depend() {
-
-	after bootmisc
-	need localmount
-	need net
-}
-
-unitinfo() {
-	einfo "$(head -n1 /opt/foldingathome/unitinfo.txt):"
-	sed -e '1,2d' /opt/foldingathome/unitinfo.txt
-}
-
-start() {
-	ebegin "Starting Folding@Home"
-	cd /opt/foldingathome
-	start-stop-daemon --chdir ${PWD} --chuid foldingathome --nicelevel 19 \
-		--make-pidfile --pidfile "${PIDFILE}" \
-		--start --background --exec ./fah6_alt -- ${FOLD_OPTS}
-	eend $?
-}
-
-stop() {
-	ebegin "Stopping Folding@Home"
-	start-stop-daemon --stop --user foldingathome --pidfile "${PIDFILE}"
-	eend $?
-}
diff --git a/sci-biology/foldingathome/files/999/folding-conf.d b/sci-biology/foldingathome/files/999/folding-conf.d
deleted file mode 100644
index 72d211f..0000000
--- a/sci-biology/foldingathome/files/999/folding-conf.d
+++ /dev/null
@@ -1,21 +0,0 @@
-# Config file for /etc/init.d/foldingathome
-#
-# The f@h client configuration can be found in /opt/foldingathome/client.cfg
-# Run /opt/foldingathome/initfolding to reconfigure that.
-#
-# Enter options here to be passed to the Folding client:
-#
-#  -oneunit		Instruct the client to quit following the completion of one work unit.
-#  -verbosity x		Sets the output level, from 1 to 9 (max). The default is 3
-#  -forceasm		Force core assembly optimizations to be used if available
-#  -advmethods		Request to be assigned any new Cores or work units.
-#  -smp x		Set the client to run on x cores in SMP mode
-#
-# A full listing of options can be found here:
-# http://www.stanford.edu/group/pandegroup/folding/console-userguide.html
-# But use of other options are not recommended when using the Folding client
-# as a service.
-#
-FOLD_OPTS=""
-PIDFILE=/var/run/folding
-
diff --git a/sci-biology/foldingathome/files/999/initfolding b/sci-biology/foldingathome/files/999/initfolding
deleted file mode 100644
index 5fe4830..0000000
--- a/sci-biology/foldingathome/files/999/initfolding
+++ /dev/null
@@ -1,6 +0,0 @@
-#!/bin/sh
-
-cd /opt/foldingathome
-/opt/foldingathome/fah6_alt -configonly
-/bin/chown -R foldingathome:nogroup /opt/foldingathome
-
diff --git a/sci-biology/foldingathome/foldingathome-999.ebuild b/sci-biology/foldingathome/foldingathome-999.ebuild
deleted file mode 100644
index cb0fc33..0000000
--- a/sci-biology/foldingathome/foldingathome-999.ebuild
+++ /dev/null
@@ -1,69 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-# This version was built with a recent enough glibc that it works
-# with glibc-2.12.1.
-
-EAPI="3"
-
-inherit eutils
-
-DESCRIPTION="Folding@Home is a distributed computing project for protein folding."
-HOMEPAGE="http://folding.stanford.edu/FAQ-SMP.html"
-SRC_URI="http://www.stanford.edu/~kasson/folding/linux/fah6_alt"
-
-LICENSE="folding-at-home"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE="mpi"
-
-RDEPEND="mpi? ( >=sys-cluster/openmpi-1.4.3 )"
-
-S="${WORKDIR}"
-
-I="opt/foldingathome"
-
-QA_DT_HASH="${I}/.*"
-QA_PRESTRIPPED="${I}/fah6_alt"
-
-pkg_setup() {
-	I="${EPREFIX}/${I}"
-}
-
-src_install() {
-	exeinto ${I}
-	doexe "${FILESDIR}/${PV}"/initfolding || die
-#pwd
-#printenv
-	doexe ${DISTDIR}/fah6_alt || die
-	newconfd "${FILESDIR}/${PV}"/folding-conf.d foldingathome || die
-	newinitd "${FILESDIR}/${PV}"/fah-init foldingathome || die
-}
-
-pkg_preinst() {
-	# the bash shell is important for "su -c" in init script
-	enewuser foldingathome -1 /bin/bash /opt/foldingathome
-}
-
-pkg_postinst() {
-	chown -R foldingathome:nogroup "${EPREFIX}"/opt/foldingathome
-	einfo "To run Folding@home in the background at boot:"
-	einfo " rc-update add foldingathome default"
-	einfo ""
-	einfo "Please run ${I}/initfolding to configure your client"
-	einfo "and edit ${EPREFIX}/etc/conf.d/foldingathome for options"
-	einfo ""
-	einfo "I encourage you to acquire a username and join team 36480."
-	einfo "http://folding.stanford.edu/English/Download#ntoc2"
-	einfo ""
-	einfo "This version was built with a recent enough glibc that it works"
-	einfo "with glibc-2.12.1."
-	einfo ""
-}
-
-pkg_postrm() {
-	einfo "Folding@home data files were not removed."
-	einfo " Remove them manually from ${I}"
-	einfo ""
-}
diff --git a/sci-biology/foldingathome/metadata.xml b/sci-biology/foldingathome/metadata.xml
deleted file mode 100644
index e6a0858..0000000
--- a/sci-biology/foldingathome/metadata.xml
+++ /dev/null
@@ -1,13 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci-biology</herd>
-<maintainer>
-<email>je_fro@gentoo.org</email>
-<name>Jeff Gardner</name>
-</maintainer>
-<longdescription lang="en">
-Folding@home is a distributed computing project which studies protein folding, misfolding, aggregation, and related diseases.
-</longdescription>
-</pkgmetadata>
-