diff options
Diffstat (limited to 'sci-chemistry/cns/cns-1.1.ebuild')
| -rw-r--r-- | sci-chemistry/cns/cns-1.1.ebuild | 144 |
1 files changed, 0 insertions, 144 deletions
diff --git a/sci-chemistry/cns/cns-1.1.ebuild b/sci-chemistry/cns/cns-1.1.ebuild deleted file mode 100644 index 20993d47664a..000000000000 --- a/sci-chemistry/cns/cns-1.1.ebuild +++ /dev/null @@ -1,144 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/cns/cns-1.1.ebuild,v 1.10 2011/06/21 16:05:16 jlec Exp $ - -inherit eutils fortran-2 toolchain-funcs - -MY_PN="${PN}_solve" -MY_P="${MY_PN}_${PV}" - -DESCRIPTION="Crystallography and NMR System" -HOMEPAGE="http://cns.csb.yale.edu/" -SRC_URI=" - ${MY_P}_basic_inputs.tar.gz - ${MY_P}_data.tar.gz - test? ( ${MY_P}_test.tar.gz )" - -SLOT="0" -LICENSE="cns" -KEYWORDS="ppc x86" -IUSE="test" - -RDEPEND=" - virtual/fortran - app-shells/tcsh" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/${MY_P}" - -RESTRICT="fetch" - -pkg_nofetch() { - einfo "Fill out the form at http://cns.csb.yale.edu/cns_request/" - einfo "and place these files:" - einfo ${A} - einfo "in ${DISTDIR}." -} - -get_fcomp() { - case $(tc-getFC) in - *gfortran* ) - FCOMP="gfortran" ;; - ifort ) - FCOMP="ifc" ;; - * ) - FCOMP=$(tc-getFC) ;; - esac -} -src_unpack() { - get_fcomp - unpack ${A} - - # The length of time must be at least 10, not 9 - # http://gcc.gnu.org/ml/fortran/2006-02/msg00198.html - epatch "${FILESDIR}"/${PV}-time-length-10.patch - - # Set up location for the build directory - # Uses obsolete `sort` syntax, so we set _POSIX2_VERSION - sed -i \ - -e "s:_CNSsolve_location_:${S}:g" \ - -e "17 s:\(.*\):\1\nsetenv _POSIX2_VERSION 199209:g" \ - "${S}"/cns_solve_env -} - -src_compile() { - local GLOBALS - if [[ $(tc-getFC) =~ g77 ]]; then - GLOBALS="-fno-globals" - fi - - # make install really means build, since it's expected to be used in-place - emake \ - CC="$(tc-getCC)" \ - F77=$(tc-getFC) \ - LD=$(tc-getFC) \ - CCFLAGS="${CFLAGS} -DCNS_ARCH_TYPE_\$(CNS_ARCH_TYPE) \$(EXT_CCFLAGS)" \ - F77OPT="${FFLAGS:- -O2} \$(CNS_MALIGN_I86)" \ - F77STD="${GLOBALS}" \ - LDFLAGS="${LDFLAGS}" \ - g77install \ - || die "emake failed" -} - -src_test() { - # We need to force on g77 manually, because we can't get aliases working - # when we source in a -c - einfo "Running tests ..." - csh -c \ - "setenv CNS_G77; source cns_solve_env; make run_tests" \ - || die "tests failed" - einfo "Displaying test results ..." - cat "${S}"/*_g77/test/*.diff-test -} - -src_install() { - # Install to locations resembling FHS - sed -i \ - -e "s:${S}:usr:g" \ - -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_ROOT usr:g" \ - -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DATA \$CNS_ROOT/share/data:g" \ - -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DOC \$CNS_ROOT/share/doc/${PF}:g" \ - -e "s:CNS_MODULE \$CNS_SOLVE/modules:CNS_MODULE \$CNS_DATA/modules:g" \ - -e "s:\$CNS_LIB:\$CNS_DATA:g" \ - -e "s:CNS_HELPLIB \$CNS_SOLVE/helplib:CNS_HELPLIB \$CNS_DATA/helplib:g" \ - -e "s:\$CNS_SOLVE/bin/cns_info:\$CNS_DATA/bin/cns_info:g" \ - "${S}"/cns_solve_env - - # Get rid of setup stuff we don't need in the installed script - sed -i \ - -e "83,$ d" \ - -e "37,46 d" \ - "${S}"/cns_solve_env - - newbin "${S}"/*_g77/bin/cns_solve* cns_solve \ - || die "install cns_solve failed" - - # Can be run by either cns_solve or cns - dosym cns_solve /usr/bin/cns - - # Don't want to install this - rm -f "${S}"/*_g77/utils/Makefile - - dobin "${S}"/*_g77/utils/* || die "install utils failed" - - dobin "${S}"/bin/cns_{edit,header,transfer,web} || die "install bin failed" - - insinto /usr/share/cns - doins -r "${S}"/libraries "${S}"/modules "${S}"/helplib - doins "${S}"/bin/cns_info - doins "${S}"/cns_solve_env - - dohtml \ - -A iq,cgi,csh,cv,def,fm,gif,hkl,inp,jpeg,lib,link,list,mask,mtf,param,pdb,pdf,pl,ps,sc,sca,sdb,seq,tbl,top \ - -f all_cns_info_template,omac,def \ - -r doc/html/* - - # Conflits with app-text/dos2unix - rm -f "${D}"/usr/bin/dos2unix -} - -pkg_postinst() { - ewarn "You must source ${ROOT}usr/share/cns/cns_solve_env" - ewarn "before running CNS. It's a C-shell script," - ewarn "so you also must be using csh or tcsh." -} |