sci-physics/lammps: Removing old packages.

(Portage version: 2.2.14/cvs/Linux x86_64, signed Manifest commit with key AC91CA52)

7 files changed, 6 insertions, 1223 deletions

diff --git a/sci-physics/lammps/ChangeLog b/sci-physics/lammps/ChangeLog
index f6d315664fd1..9351d4b9e44a 100644
--- a/sci-physics/lammps/ChangeLog
+++ b/sci-physics/lammps/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-physics/lammps
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/ChangeLog,v 1.81 2015/03/22 04:03:09 nicolasbock Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/ChangeLog,v 1.82 2015/03/23 12:35:41 nicolasbock Exp $
+
+  23 Mar 2015; Nicolas Bock <nicolasbock@gentoo.org> -lammps-20140905.ebuild,
+  -lammps-20140925.ebuild, -lammps-20141105.ebuild, -lammps-20141123.ebuild,
+  -lammps-20141124.ebuild, -lammps-20141126.ebuild:
+  sci-physics/lammps: Removing old packages.
 
   22 Mar 2015; Nicolas Bock <nicolasbock@gentoo.org> -lammps-20140614.ebuild,
   -lammps-20140711.ebuild, -lammps-20140806.ebuild, -lammps-20140808.ebuild,
diff --git a/sci-physics/lammps/lammps-20140905.ebuild b/sci-physics/lammps/lammps-20140905.ebuild
deleted file mode 100644
index f716b6f1e688..000000000000
--- a/sci-physics/lammps/lammps-20140905.ebuild
+++ /dev/null
@@ -1,199 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20140905.ebuild,v 1.3 2014/12/28 10:13:27 ago Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}
diff --git a/sci-physics/lammps/lammps-20140925.ebuild b/sci-physics/lammps/lammps-20140925.ebuild
deleted file mode 100644
index 773681b65f37..000000000000
--- a/sci-physics/lammps/lammps-20140925.ebuild
+++ /dev/null
@@ -1,199 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20140925.ebuild,v 1.1 2014/09/30 02:47:26 nicolasbock Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}
diff --git a/sci-physics/lammps/lammps-20141105.ebuild b/sci-physics/lammps/lammps-20141105.ebuild
deleted file mode 100644
index 186cb2aa7f6f..000000000000
--- a/sci-physics/lammps/lammps-20141105.ebuild
+++ /dev/null
@@ -1,206 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20141105.ebuild,v 1.1 2014/11/08 14:00:39 nicolasbock Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-snap
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	emake -C src yes-user-eff
-	emake -C src yes-user-fep
-	use mpi && emake -C src yes-user-lb
-	emake -C src yes-user-phonon
-	emake -C src yes-user-sph
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}
diff --git a/sci-physics/lammps/lammps-20141123.ebuild b/sci-physics/lammps/lammps-20141123.ebuild
deleted file mode 100644
index 92208bd8b94b..000000000000
--- a/sci-physics/lammps/lammps-20141123.ebuild
+++ /dev/null
@@ -1,206 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20141123.ebuild,v 1.1 2014/11/24 19:41:32 nicolasbock Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-snap
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	emake -C src yes-user-eff
-	emake -C src yes-user-fep
-	use mpi && emake -C src yes-user-lb
-	emake -C src yes-user-phonon
-	emake -C src yes-user-sph
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}
diff --git a/sci-physics/lammps/lammps-20141124.ebuild b/sci-physics/lammps/lammps-20141124.ebuild
deleted file mode 100644
index ed502364222d..000000000000
--- a/sci-physics/lammps/lammps-20141124.ebuild
+++ /dev/null
@@ -1,206 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20141124.ebuild,v 1.1 2014/12/16 20:36:04 nicolasbock Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-snap
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	emake -C src yes-user-eff
-	emake -C src yes-user-fep
-	use mpi && emake -C src yes-user-lb
-	emake -C src yes-user-phonon
-	emake -C src yes-user-sph
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}
diff --git a/sci-physics/lammps/lammps-20141126.ebuild b/sci-physics/lammps/lammps-20141126.ebuild
deleted file mode 100644
index 9aa717270d78..000000000000
--- a/sci-physics/lammps/lammps-20141126.ebuild
+++ /dev/null
@@ -1,206 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/lammps/lammps-20141126.ebuild,v 1.1 2014/12/16 20:36:04 nicolasbock Exp $
-
-EAPI=5
-
-inherit eutils flag-o-matic fortran-2 multilib
-
-convert_month() {
-	case $1 in
-		01) echo Jan
-			;;
-		02) echo Feb
-			;;
-		03) echo Mar
-			;;
-		04) echo Apr
-			;;
-		05) echo May
-			;;
-		06) echo Jun
-			;;
-		07) echo Jul
-			;;
-		08) echo Aug
-			;;
-		09) echo Sep
-			;;
-		10) echo Oct
-			;;
-		11) echo Nov
-			;;
-		12) echo Dec
-			;;
-		*)  echo unknown
-			;;
-	esac
-}
-
-MY_P=${PN}-$((10#${PV:6:2}))$(convert_month ${PV:4:2})${PV:2:2}
-
-DESCRIPTION="Large-scale Atomic/Molecular Massively Parallel Simulator"
-HOMEPAGE="http://lammps.sandia.gov/"
-SRC_URI="http://lammps.sandia.gov/tars/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc examples gzip lammps-memalign mpi static-libs"
-
-DEPEND="
-	mpi? (
-		virtual/blas
-		virtual/lapack
-		virtual/mpi
-	)
-	sci-libs/voro++
-	"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-lmp_emake() {
-	local LAMMPS_INCLUDEFLAGS
-	LAMMPS_INCLUDEFLAGS="$(usex gzip '-DLAMMPS_GZIP' '')"
-	LAMMPS_INCLUDEFLAGS+="$(usex lammps-memalign ' -DLAMMPS_MEMALIGN' '')"
-
-	# The lammps makefile uses CC to indicate the C++ compiler.
-	emake \
-		ARCHIVE=$(tc-getAR) \
-		CC=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		F90=$(usex mpi "mpif90" "$(tc-getFC)") \
-		LINK=$(usex mpi "mpic++" "$(tc-getCXX)") \
-		CCFLAGS="${CXXFLAGS}" \
-		F90FLAGS="${FCFLAGS}" \
-		LINKFLAGS="${LDFLAGS}" \
-		LMP_INC="${LAMMPS_INCLUDEFLAGS}" \
-		MPI_INC=$(usex mpi '' "-I../STUBS") \
-		MPI_PATH=$(usex mpi '' '-L../STUBS') \
-		MPI_LIB=$(usex mpi '' '-lmpi_stubs') \
-		user-atc_SYSLIB="$(usex mpi "$($(tc-getPKG_CONFIG) --libs blas) $($(tc-getPKG_CONFIG) --libs lapack)" '')"\
-		"$@"
-}
-
-src_prepare() {
-	# Fix inconsistent use of SHFLAGS.
-	sed -i \
-		-e 's:voronoi_SYSINC\s\+=.*$:voronoi_SYSINC = -I/usr/include/voro++:' \
-		-e 's:voronoi_SYSPATH\s\+=.*$:voronoi_SYSPATH =:' \
-		src/VORONOI/Makefile.lammps || die
-
-	# Fix missing .so name.
-	sed -i \
-		-e 's:SHLIBFLAGS\s\+=\s\+:SHLIBFLAGS = -Wl,-soname,liblammps.so.0 :' \
-		src/MAKE/Makefile.serial || die
-
-	# Fix makefile in tools.
-	sed -i \
-		-e 's:g++:$(CXX) $(CXXFLAGS):' \
-		-e 's:gcc:$(CC) $(CCFLAGS):' \
-		-e 's:ifort:$(FC) $(FCFLAGS):' \
-		tools/Makefile || die
-}
-
-src_compile() {
-	# Prepare compiler flags.
-	append-cxxflags -fPIC -I../../src
-	append-fflags -fPIC
-
-	# Compile stubs for serial version.
-	use mpi || lmp_emake -C src stubs
-
-	# Build packages
-	emake -C src yes-asphere
-	emake -C src yes-body
-	emake -C src yes-class2
-	emake -C src yes-colloid
-	emake -C src yes-dipole
-	emake -C src yes-fld
-	#emake -C src yes-gpu
-	emake -C src yes-granular
-	# Need OpenKIM external dependency.
-	#emake -C src yes-kim
-	# Need Kokkos external dependency.
-	#emake -C src yes-kokkos
-	emake -C src yes-kspace
-	emake -C src yes-manybody
-	emake -C src yes-mc
-	lmp_emake -C src yes-meam
-	lmp_emake -j1 -C lib/meam -f Makefile.gfortran
-	emake -C src yes-misc
-	emake -C src yes-molecule
-	#emake -C src yes-mpiio
-	emake -C src yes-opt
-	emake -C src yes-peri
-	emake -C src yes-poems
-	lmp_emake -C lib/poems -f Makefile.g++
-	emake -C src yes-reax
-	lmp_emake -j1 -C lib/reax -f Makefile.gfortran
-	emake -C src yes-replica
-	emake -C src yes-rigid
-	emake -C src yes-shock
-	emake -C src yes-snap
-	emake -C src yes-srd
-	emake -C src yes-voronoi
-	emake -C src yes-xtc
-
-	emake -C src yes-user-eff
-	emake -C src yes-user-fep
-	use mpi && emake -C src yes-user-lb
-	emake -C src yes-user-phonon
-	emake -C src yes-user-sph
-
-	if use mpi; then
-		emake -C src yes-user-atc
-		lmp_emake -C lib/atc -f Makefile.g++
-	fi
-
-	if use static-libs; then
-		# Build static library.
-		lmp_emake -C src makelib
-		lmp_emake -C src -f Makefile.lib serial
-	fi
-
-	# Build shared library.
-	lmp_emake -C src makeshlib
-	lmp_emake -C src -f Makefile.shlib serial
-
-	# Compile main executable.
-	lmp_emake -C src serial
-
-	# Compile tools.
-	emake -C tools binary2txt chain micelle2d data2xmovie
-}
-
-src_install() {
-	use static-libs && newlib.a src/liblammps_serial.a liblammps.a
-	newlib.so src/liblammps_serial.so liblammps.so.0.0.0
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so
-	dosym liblammps.so.0.0.0 /usr/$(get_libdir)/liblammps.so.0
-	newbin src/lmp_serial lmp
-	dobin tools/binary2txt
-	# Don't forget to add header files of optional packages as they are added
-	# to this ebuild. There may also be .mod files from Fortran based
-	# packages.
-	insinto "/usr/include/${PN}"
-	doins -r src/*.h lib/meam/*.mod
-
-	local LAMMPS_POTENTIALS="usr/share/${PN}/potentials"
-	insinto "/${LAMMPS_POTENTIALS}"
-	doins potentials/*
-	echo "LAMMPS_POTENTIALS=${EROOT}${LAMMPS_POTENTIALS}" > 99lammps
-	doenvd 99lammps
-
-	if use examples; then
-		local LAMMPS_EXAMPLES="/usr/share/${PN}/examples"
-		insinto "${LAMMPS_EXAMPLES}"
-		doins -r examples/*
-	fi
-
-	dodoc README
-	if use doc; then
-		dodoc doc/Manual.pdf
-		dohtml -r doc/*
-	fi
-}