Initial import. Thankss Oliver Borm for his work and everyone else in bug #49953.

(Portage version: 2.1.4.4)

5 files changed, 354 insertions, 0 deletions

diff --git a/sci-libs/parmetis/ChangeLog b/sci-libs/parmetis/ChangeLog
new file mode 100644
index 000000000000..2c13de128bdf
--- /dev/null
+++ b/sci-libs/parmetis/ChangeLog
@@ -0,0 +1,11 @@
+# ChangeLog for sci-libs/parmetis
+# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/parmetis/ChangeLog,v 1.1 2008/03/27 19:01:47 bicatali Exp $
+
+*parmetis-3.1 (27 Mar 2008)
+
+  27 Mar 2008; Sébastien Fabbro <bicatali@gentoo.org>
+  +files/parmetis-3.1-autotools.patch, +metadata.xml, +parmetis-3.1.ebuild:
+  Initial import. Thankss Oliver Borm for his work and everyone else in bug
+  #49953.
+
diff --git a/sci-libs/parmetis/Manifest b/sci-libs/parmetis/Manifest
new file mode 100644
index 000000000000..bf28d0fcfba4
--- /dev/null
+++ b/sci-libs/parmetis/Manifest
@@ -0,0 +1,5 @@
+AUX parmetis-3.1-autotools.patch 10377 RMD160 a76656c794904750035d390468274220ceb93413 SHA1 f707bc1e4c27d4553a07bc84e12d15ef0aee82f3 SHA256 f68baa12756cbf9b28963e8542feaa55c19cd08ee96929a945b77e0283b9cd73
+DIST ParMetis-3.1.tar.gz 5286085 RMD160 08996ac3724c18b66ff7fc03c1ffecae4d9206e1 SHA1 831ef886269b7c56412a9cc62116873e796c4b76 SHA256 11485828fe25436dc6d41cb048bc4b744969b51d4b751996007612aa95d5ff16
+EBUILD parmetis-3.1.ebuild 790 RMD160 a15b69fe4200c8e676ad0481745a3cc133c92158 SHA1 b9fc8bc179861c165e5737dd5fe24d224c77fbaa SHA256 0a3d51f0bcb9b5014d0e5df5758845b5c79688398a91988547be0ea1a22c8a5c
+MISC ChangeLog 365 RMD160 e76948658e659878b260f4f07d1c1146314532fc SHA1 4ee3575074cf647e25ced509b627d154669b67d7 SHA256 5c6415e7f61ecdfb5934d1134e7b8593787d7bd86d19b39260c109b177b87c20
+MISC metadata.xml 567 RMD160 0565f147e7f67469216f64490469c39a78040073 SHA1 619ff63c86b9da320ad0d6af86c83a78e748ef7d SHA256 e7b13d4ac35de3236571c5efd0cbf9143333a4978e9dbe277b45ba3a5b4bd29a
diff --git a/sci-libs/parmetis/files/parmetis-3.1-autotools.patch b/sci-libs/parmetis/files/parmetis-3.1-autotools.patch
new file mode 100644
index 000000000000..9d4fba0120e6
--- /dev/null
+++ b/sci-libs/parmetis/files/parmetis-3.1-autotools.patch
@@ -0,0 +1,286 @@
+--- acx_mpi.m4 	1970-01-01 01:00:00.000000000 +0100
++++ acx_mpi.m4	2008-02-01 16:24:54.723228974 +0000
+@@ -0,0 +1,183 @@
++##### http://autoconf-archive.cryp.to/acx_mpi.html
++#
++# SYNOPSIS
++#
++#   ACX_MPI([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
++#
++# DESCRIPTION
++#
++#   This macro tries to find out how to compile programs that use MPI
++#   (Message Passing Interface), a standard API for parallel process
++#   communication (see http://www-unix.mcs.anl.gov/mpi/)
++#
++#   On success, it sets the MPICC, MPICXX, MPIF77, or MPIFC output
++#   variable to the name of the MPI compiler, depending upon the
++#   current language. (This may just be $CC/$CXX/$F77/$FC, but is more
++#   often something like mpicc/mpiCC/mpif77/mpif90.) It also sets
++#   MPILIBS to any libraries that are needed for linking MPI (e.g.
++#   -lmpi or -lfmpi, if a special MPICC/MPICXX/MPIF77/MPIFC was not
++#   found).
++#
++#   If you want to compile everything with MPI, you should set:
++#
++#       CC="MPICC" #OR# CXX="MPICXX" #OR# F77="MPIF77" #OR# FC="MPIFC"
++#       LIBS="$MPILIBS $LIBS"
++#
++#   NOTE: The above assumes that you will use $CC (or whatever) for
++#   linking as well as for compiling. (This is the default for automake
++#   and most Makefiles.)
++#
++#   The user can force a particular library/compiler by setting the
++#   MPICC/MPICXX/MPIF77/MPIFC and/or MPILIBS environment variables.
++#
++#   ACTION-IF-FOUND is a list of shell commands to run if an MPI
++#   library is found, and ACTION-IF-NOT-FOUND is a list of commands to
++#   run if it is not found. If ACTION-IF-FOUND is not specified, the
++#   default action will define HAVE_MPI.
++#
++# LAST MODIFICATION
++#
++#   2007-07-29
++#
++# COPYLEFT
++#
++#   Copyright (c) 2007 Steven G. Johnson <stevenj@alum.mit.edu>
++#   Copyright (c) 2007 Julian C. Cummings <cummings@cacr.caltech.edu>
++#
++#   This program is free software: you can redistribute it and/or
++#   modify it under the terms of the GNU General Public License as
++#   published by the Free Software Foundation, either version 3 of the
++#   License, or (at your option) any later version.
++#
++#   This program is distributed in the hope that it will be useful, but
++#   WITHOUT ANY WARRANTY; without even the implied warranty of
++#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
++#   General Public License for more details.
++#
++#   You should have received a copy of the GNU General Public License
++#   along with this program. If not, see
++#   <http://www.gnu.org/licenses/>.
++#
++#   As a special exception, the respective Autoconf Macro's copyright
++#   owner gives unlimited permission to copy, distribute and modify the
++#   configure scripts that are the output of Autoconf when processing
++#   the Macro. You need not follow the terms of the GNU General Public
++#   License when using or distributing such scripts, even though
++#   portions of the text of the Macro appear in them. The GNU General
++#   Public License (GPL) does govern all other use of the material that
++#   constitutes the Autoconf Macro.
++#
++#   This special exception to the GPL applies to versions of the
++#   Autoconf Macro released by the Autoconf Macro Archive. When you
++#   make and distribute a modified version of the Autoconf Macro, you
++#   may extend this special exception to the GPL to apply to your
++#   modified version as well.
++
++AC_DEFUN([ACX_MPI], [
++AC_PREREQ(2.50) dnl for AC_LANG_CASE
++
++AC_LANG_CASE([C], [
++	AC_REQUIRE([AC_PROG_CC])
++	AC_ARG_VAR(MPICC,[MPI C compiler command])
++	AC_CHECK_PROGS(MPICC, mpicc hcc mpxlc_r mpxlc mpcc cmpicc, $CC)
++	acx_mpi_save_CC="$CC"
++	CC="$MPICC"
++	AC_SUBST(MPICC)
++],
++[C++], [
++	AC_REQUIRE([AC_PROG_CXX])
++	AC_ARG_VAR(MPICXX,[MPI C++ compiler command])
++	AC_CHECK_PROGS(MPICXX, mpic++ mpicxx mpiCC hcp mpxlC_r mpxlC mpCC cmpic++, $CXX)
++	acx_mpi_save_CXX="$CXX"
++	CXX="$MPICXX"
++	AC_SUBST(MPICXX)
++],
++[Fortran 77], [
++	AC_REQUIRE([AC_PROG_F77])
++	AC_ARG_VAR(MPIF77,[MPI Fortran 77 compiler command])
++	AC_CHECK_PROGS(MPIF77, mpif77 hf77 mpxlf_r mpxlf mpf77 cmpifc, $F77)
++	acx_mpi_save_F77="$F77"
++	F77="$MPIF77"
++	AC_SUBST(MPIF77)
++],
++[Fortran], [
++	AC_REQUIRE([AC_PROG_FC])
++	AC_ARG_VAR(MPIFC,[MPI Fortran compiler command])
++	AC_CHECK_PROGS(MPIFC, mpif90 mpxlf95_r mpxlf90_r mpxlf95 mpxlf90 mpf90 cmpif90c, $FC)
++	acx_mpi_save_FC="$FC"
++	FC="$MPIFC"
++	AC_SUBST(MPIFC)
++])
++
++if test x = x"$MPILIBS"; then
++	AC_LANG_CASE([C], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])],
++		[C++], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])],
++		[Fortran 77], [AC_MSG_CHECKING([for MPI_Init])
++			AC_LINK_IFELSE([AC_LANG_PROGRAM([],[      call MPI_Init])],[MPILIBS=" "
++				AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])],
++		[Fortran], [AC_MSG_CHECKING([for MPI_Init])
++			AC_LINK_IFELSE([AC_LANG_PROGRAM([],[      call MPI_Init])],[MPILIBS=" "
++				AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])])
++fi
++AC_LANG_CASE([Fortran 77], [
++	if test x = x"$MPILIBS"; then
++		AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"])
++	fi
++	if test x = x"$MPILIBS"; then
++		AC_CHECK_LIB(fmpich, MPI_Init, [MPILIBS="-lfmpich"])
++	fi
++],
++[Fortran], [
++	if test x = x"$MPILIBS"; then
++		AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"])
++	fi
++	if test x = x"$MPILIBS"; then
++		AC_CHECK_LIB(mpichf90, MPI_Init, [MPILIBS="-lmpichf90"])
++	fi
++])
++if test x = x"$MPILIBS"; then
++	AC_CHECK_LIB(mpi, MPI_Init, [MPILIBS="-lmpi"])
++fi
++if test x = x"$MPILIBS"; then
++	AC_CHECK_LIB(mpich, MPI_Init, [MPILIBS="-lmpich"])
++fi
++
++dnl We have to use AC_TRY_COMPILE and not AC_CHECK_HEADER because the
++dnl latter uses $CPP, not $CC (which may be mpicc).
++AC_LANG_CASE([C], [if test x != x"$MPILIBS"; then
++	AC_MSG_CHECKING([for mpi.h])
++	AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS=""
++		AC_MSG_RESULT(no)])
++fi],
++[C++], [if test x != x"$MPILIBS"; then
++	AC_MSG_CHECKING([for mpi.h])
++	AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS=""
++		AC_MSG_RESULT(no)])
++fi],
++[Fortran 77], [if test x != x"$MPILIBS"; then
++	AC_MSG_CHECKING([for mpif.h])
++	AC_COMPILE_IFELSE([AC_LANG_PROGRAM([],[      include 'mpif.h'])],[AC_MSG_RESULT(yes)], [MPILIBS=""
++		AC_MSG_RESULT(no)])
++fi],
++[Fortran], [if test x != x"$MPILIBS"; then
++	AC_MSG_CHECKING([for mpif.h])
++	AC_COMPILE_IFELSE([AC_LANG_PROGRAM([],[      include 'mpif.h'])],[AC_MSG_RESULT(yes)], [MPILIBS=""
++		AC_MSG_RESULT(no)])
++fi])
++
++AC_LANG_CASE([C], [CC="$acx_mpi_save_CC"],
++	[C++], [CXX="$acx_mpi_save_CXX"],
++	[Fortran 77], [F77="$acx_mpi_save_F77"],
++	[Fortran], [FC="$acx_mpi_save_FC"])
++
++AC_SUBST(MPILIBS)
++
++# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
++if test x = x"$MPILIBS"; then
++        $2
++        :
++else
++        ifelse([$1],,[AC_DEFINE(HAVE_MPI,1,[Define if you have the MPI library.])],[$1])
++        :
++fi
++])dnl ACX_MPI
+--- configure.ac 	1970-01-01 01:00:00.000000000 +0100
++++ configure.ac	2008-03-25 11:18:28.135641410 +0000
+@@ -0,0 +1,17 @@
++# -*- Autoconf -*-
++AC_PREREQ(2.59)
++AC_INIT(parmetis, 3.1, karypis@cs.umn.edu)
++AM_INIT_AUTOMAKE([foreign])
++AC_CONFIG_HEADER([config.h])
++AC_PROG_INSTALL
++AC_PROG_LIBTOOL
++AC_CHECK_LIB(m, sqrt)
++sinclude(acx_mpi.m4)
++AC_LANG_PUSH([C])
++ACX_MPI([], AC_MSG_ERROR([could not compile an mpi test program]))
++AC_CONFIG_FILES([Makefile 
++		 parmetis.pc
++		 ParMETISLib/Makefile
++		 METISLib/Makefile
++		 Programs/Makefile])
++AC_OUTPUT
+--- parmetis.pc.in 	1970-01-01 01:00:00.000000000 +0100
++++ parmetis.pc.in	2008-03-25 11:04:08.281809709 +0000
+@@ -0,0 +1,10 @@
++prefix=@prefix@
++exec_prefix=@exec_prefix@
++libdir=@libdir@
++includedir=@includedir@
++
++Name: ParMetis
++Description: Software for parallel (mpi) unstructured graph partitioning
++Version: @VERSION@
++Libs: -L${libdir} -lmetis -lparmetis
++Cflags: -I${includedir}
+--- ./METISLib/Makefile.am 	1970-01-01 01:00:00.000000000 +0100
++++ ./METISLib/Makefile.am	2008-03-25 09:45:51.421429040 +0000
+@@ -0,0 +1,18 @@
++include_HEADERS = defs.h macros.h metis.h proto.h rename.h \
++	stdheaders.h struct.h
++pkgincludedir = $(includedir)/metis
++
++lib_LTLIBRARIES = libmetis.la
++libmetis_la_SOURCES = \
++	coarsen.c fm.c initpart.c match.c ccgraph.c \
++	pmetis.c pqueue.c refine.c util.c timing.c debug.c \
++	bucketsort.c graph.c stat.c kmetis.c kwayrefine.c \
++	kwayfm.c balance.c ometis.c srefine.c sfm.c separator.c \
++	mincover.c mmd.c mesh.c meshpart.c frename.c fortran.c \
++	myqsort.c compress.c parmetis.c estmem.c \
++	mpmetis.c mcoarsen.c mmatch.c minitpart.c mbalance.c \
++	mutil.c mkmetis.c mkwayrefine.c mkwayfmh.c \
++	mrefine2.c minitpart2.c mbalance2.c mfm2.c \
++	kvmetis.c kwayvolrefine.c kwayvolfm.c subdomains.c \
++	mfm.c memory.c mrefine.c checkgraph.c
++libmetis_la_LDFLAGS = -no-undefined -version-info 4:1:0 
+--- ./ParMETISLib/Makefile.am 	1970-01-01 01:00:00.000000000 +0100
++++ ./ParMETISLib/Makefile.am	2008-03-25 11:16:59.090567020 +0000
+@@ -0,0 +1,21 @@
++include_HEADERS = defs.h macros.h parmetislib.h proto.h \
++	rename.h stdheaders.h struct.h
++pkgincludedir = $(includedir)/parmetis
++
++lib_LTLIBRARIES = libparmetis.la
++libparmetis_la_SOURCES = \
++	comm.c util.c debug.c setup.c grsetup.c timer.c \
++	node_refine.c initmsection.c order.c \
++	xyzpart.c pspases.c frename.c \
++	iintsort.c iidxsort.c ikeysort.c ikeyvalsort.c \
++	kmetis.c gkmetis.c ometis.c \
++	initpart.c match.c coarsen.c \
++	kwayfm.c kwayrefine.c kwaybalance.c \
++	remap.c stat.c fpqueue.c \
++	ametis.c rmetis.c lmatch.c initbalance.c \
++	mdiffusion.c diffutil.c wave.c \
++	csrmatch.c redomylink.c balancemylink.c \
++	selectq.c akwayfm.c serial.c move.c \
++	mmetis.c mesh.c memory.c weird.c backcompat.c
++libparmetis_la_LDFLAGS = -no-undefined -version-info 3:1:0
++libparmetis_la_LIBADD = @MPILIBS@
+--- ./Programs/Makefile.am 	1970-01-01 01:00:00.000000000 +0100
++++ ./Programs/Makefile.am	2008-03-25 11:16:01.063260233 +0000
+@@ -0,0 +1,13 @@
++AM_CPPFLAGS = -I$(top_srcdir)/ParMETISLib
++LDADD = $(top_builddir)/METISLib/libmetis.la \
++	$(top_builddir)/ParMETISLib/libparmetis.la
++
++check_PROGRAMS = ptest mtest
++ptest_SOURCES = ptest.c io.c adaptgraph.c
++mtest_SOURCES = mtest.c io.c
++
++MPIRUN = mpirun -np 4
++
++check-local: $(check_PROGRAMS)
++	$(MPIRUN) ptest ../Graphs/rotor.graph
++	$(MPIRUN) mtest ../Graphs/bricks.hex3d 2
+--- ./Makefile.am 	1970-01-01 01:00:00.000000000 +0100
++++ ./Makefile.am	2008-03-26 00:34:09.072802498 +0000
+@@ -0,0 +1,3 @@
++SUBDIRS = METISLib ParMETISLib Programs
++EXTRA_DIST = CHANGES VERSION parmetis.pc.in
++include_HEADERS = parmetis.h
diff --git a/sci-libs/parmetis/metadata.xml b/sci-libs/parmetis/metadata.xml
new file mode 100644
index 000000000000..9a56af38eb17
--- /dev/null
+++ b/sci-libs/parmetis/metadata.xml
@@ -0,0 +1,13 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci</herd>
+<longdescription lang="en">
+  ParMETIS is an MPI-based parallel library that implements a variety
+  of algorithms for partitioning unstructured graphs and for computing
+  fill-reducing orderings of sparse matrices. ParMETIS extends the
+  functionality provided by METIS and includes routines that are
+  especially suited for parallel AMR computations and large scale
+  numerical simulations.
+</longdescription>
+</pkgmetadata>
diff --git a/sci-libs/parmetis/parmetis-3.1.ebuild b/sci-libs/parmetis/parmetis-3.1.ebuild
new file mode 100644
index 000000000000..76ae880952e0
--- /dev/null
+++ b/sci-libs/parmetis/parmetis-3.1.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2008 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/parmetis/parmetis-3.1.ebuild,v 1.1 2008/03/27 19:01:47 bicatali Exp $
+
+inherit eutils autotools
+
+MYP=ParMetis-${PV}
+
+DESCRIPTION="Parallel graph partitioner"
+HOMEPAGE="http://www-users.cs.umn.edu/~karypis/metis/parmetis/"
+SRC_URI="http://glaros.dtc.umn.edu/gkhome/fetch/sw/${PN}/${MYP}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+LICENSE="free-noncomm"
+SLOT="0"
+IUSE="doc"
+
+DEPEND="virtual/mpi"
+RDEPEND="${DEPEND}
+	!sci-libs/metis"
+
+S="${WORKDIR}/${MYP}"
+
+src_unpack() {
+	unpack ${A}
+	cd "${S}"
+	epatch "${FILESDIR}"/${P}-autotools.patch
+	eautoreconf
+	export CC=mpicc
+}
+
+src_install() {
+	emake DESTDIR="${D}" install || die "emake install failed"
+	dodoc REAME CHANGES
+	if use doc; then
+		insinto /usr/share/doc/${PF}
+		doins Manual/*.pdf || die
+	fi
+}