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authorJustin Lecher <jlec@gentoo.org>2014-12-26 13:48:27 +0000
committerJustin Lecher <jlec@gentoo.org>2014-12-26 13:48:27 +0000
commitdcffccf5bd28436e018180e8e550a7b6ae8d1c95 (patch)
tree0a057e9c604ad03bae5547dae307de6e9198300d /sci-chemistry
parentsci-chemistry/dssp: Drop old, fixes #525622 (diff)
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sci-chemistry/dssp: Drop old, fixes #525622
(Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/dssp/ChangeLog6
-rw-r--r--sci-chemistry/dssp/dssp-0.70831.ebuild46
-rw-r--r--sci-chemistry/dssp/dssp-2.0.4.ebuild40
-rw-r--r--sci-chemistry/dssp/dssp-2.1.0.ebuild39
4 files changed, 5 insertions, 126 deletions
diff --git a/sci-chemistry/dssp/ChangeLog b/sci-chemistry/dssp/ChangeLog
index d1255c34e0c3..05e7e8cdd3ab 100644
--- a/sci-chemistry/dssp/ChangeLog
+++ b/sci-chemistry/dssp/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/dssp
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.15 2014/12/26 13:16:08 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.16 2014/12/26 13:48:27 jlec Exp $
+
+ 26 Dec 2014; Justin Lecher <jlec@gentoo.org> -dssp-0.70831.ebuild,
+ -dssp-2.0.4.ebuild, -dssp-2.1.0.ebuild:
+ Drop old, fixes #525622
26 Dec 2014; Agostino Sarubbo <ago@gentoo.org> dssp-2.2.1-r1.ebuild:
Stable for x86, wrt bug #525624
diff --git a/sci-chemistry/dssp/dssp-0.70831.ebuild b/sci-chemistry/dssp/dssp-0.70831.ebuild
deleted file mode 100644
index a6b60a499234..000000000000
--- a/sci-chemistry/dssp/dssp-0.70831.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-0.70831.ebuild,v 1.1 2012/06/13 11:01:40 jlec Exp $
-
-EAPI="2"
-
-inherit toolchain-funcs flag-o-matic
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/"
-#SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz"
-SRC_URI="${P/./}cmbi.tar.gz"
-
-LICENSE="free-noncomm"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE=""
-RESTRICT="fetch"
-
-S="${WORKDIR}"/${PN}
-
-pkg_nofetch() {
- elog "Download ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz --"
- elog "Rename it to ${A} and place it in ${DISTDIR}"
-}
-
-src_prepare() {
- cp "${FILESDIR}"/Makefile .
- append-flags -DGCC
-}
-
-src_compile() {
- emake CC="$(tc-getCC)" || die
-}
-
-src_install() {
- dobin dssp || die
- dodoc README.TXT || die
- dohtml index.html || die
-}
-
-pkg_postinst() {
- elog "Go to ${HOMEPAGE} and return the license agreement."
- elog "One of its requirements is citing the article:"
- elog "Kabsch, W. & Sander, C. Biopolymers 22:2577-2637 (1983)."
-}
diff --git a/sci-chemistry/dssp/dssp-2.0.4.ebuild b/sci-chemistry/dssp/dssp-2.0.4.ebuild
deleted file mode 100644
index fb11953d227f..000000000000
--- a/sci-chemistry/dssp/dssp-2.0.4.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-2.0.4.ebuild,v 1.2 2013/03/06 13:59:23 jlec Exp $
-
-EAPI=4
-
-inherit eutils multilib toolchain-funcs
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/"
-SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz"
-
-LICENSE="Boost-1.0"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE=""
-
-RDEPEND="dev-libs/boost"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- tc-export CXX
-
- cat >> make.config <<- EOF
- BOOST_LIB_SUFFIX = -mt
- BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)"
- BOOST_INC_DIR = "${EPREFIX}/usr/include"
- EOF
-
- epatch \
- "${FILESDIR}"/${P}-gcc47.patch \
- "${FILESDIR}"/${P}-gentoo.patch
-}
-
-src_install() {
- dobin mkdssp
- dosym mkdssp /usr/bin/dssp
- doman doc/mkdssp.1
- dodoc README.txt changelog
-}
diff --git a/sci-chemistry/dssp/dssp-2.1.0.ebuild b/sci-chemistry/dssp/dssp-2.1.0.ebuild
deleted file mode 100644
index b375c6dfa3d3..000000000000
--- a/sci-chemistry/dssp/dssp-2.1.0.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-2.1.0.ebuild,v 1.2 2013/07/09 08:34:28 jlec Exp $
-
-EAPI=5
-
-inherit eutils multilib toolchain-funcs
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/"
-SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz"
-
-LICENSE="Boost-1.0"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE=""
-
-RDEPEND="dev-libs/boost:="
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- tc-export CXX
-
- cat >> make.config <<- EOF
- BOOST_LIB_SUFFIX = -mt
- BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)"
- BOOST_INC_DIR = "${EPREFIX}/usr/include"
- EOF
-
- epatch \
- "${FILESDIR}"/${P}-gentoo.patch
-}
-
-src_install() {
- dobin mkdssp
- dosym mkdssp /usr/bin/dssp
- doman doc/mkdssp.1
- dodoc README.txt changelog
-}