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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2008-05-23 17:28:35 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2008-05-23 17:28:35 +0000 |
| commit | e397e649c95752c35237981b6750095fbf33359b (patch) | |
| tree | d00d66ba5daa8509775dfab9b4076e38bf6f44c0 /sci-biology/blat | |
| parent | Version bump (diff) | |
| download | gentoo-2-e397e649c95752c35237981b6750095fbf33359b.tar.gz gentoo-2-e397e649c95752c35237981b6750095fbf33359b.tar.bz2 gentoo-2-e397e649c95752c35237981b6750095fbf33359b.zip | |
New package from sunrise, bug 135307
(Portage version: 2.1.4.4)
Diffstat (limited to 'sci-biology/blat')
| -rw-r--r-- | sci-biology/blat/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/blat/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/blat/blat-34.ebuild | 34 | ||||
| -rw-r--r-- | sci-biology/blat/metadata.xml | 9 |
4 files changed, 56 insertions, 0 deletions
diff --git a/sci-biology/blat/ChangeLog b/sci-biology/blat/ChangeLog new file mode 100644 index 000000000000..5b8084514675 --- /dev/null +++ b/sci-biology/blat/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/blat +# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/blat/ChangeLog,v 1.1 2008/05/23 17:28:35 weaver Exp $ + +*blat-34 (23 May 2008) + + 23 May 2008; weaver <weaver@gentoo.org> +blat-34.ebuild: + Initial commit. New package from sunrise, bug 135307 + diff --git a/sci-biology/blat/Manifest b/sci-biology/blat/Manifest new file mode 100644 index 000000000000..6a0a510a37f2 --- /dev/null +++ b/sci-biology/blat/Manifest @@ -0,0 +1,4 @@ +DIST blatSrc34.zip 2142975 RMD160 6c8226305c56ea56504103db6ef401841bc0c6f7 SHA1 4208451b5fa5f6cf30d15afb1df79edc850735db SHA256 b764828fdf8ef4c9994ae4b6148340a776493475edb573b6adf63ae7ca9b2629 +EBUILD blat-34.ebuild 888 RMD160 a83a5b73219305277abc87cd497b34f1d1591ccb SHA1 e2f98d36e7d80a1622d672939faf78c5f6247ba9 SHA256 acb4be978ed5abd18ee87b3b4a53a4c544f5080150c72a2d667dad2854391a2d +MISC ChangeLog 256 RMD160 a8c846bfbce6d74f2e022189d8d1cd5cbba70f19 SHA1 b633f57022d0ac22ee2b1ad731b43c02f337fb26 SHA256 da35336420071835fffda539e1bf4721db080d82089772b971523f725fbc023f +MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/blat/blat-34.ebuild b/sci-biology/blat/blat-34.ebuild new file mode 100644 index 000000000000..2852feece89c --- /dev/null +++ b/sci-biology/blat/blat-34.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/blat/blat-34.ebuild,v 1.1 2008/05/23 17:28:35 weaver Exp $ + +inherit toolchain-funcs + +DESCRIPTION="The BLAST-Like Alignment Tool, a fast genomic sequence aligner" +LICENSE="blat" +HOMEPAGE="http://www.cse.ucsc.edu/~kent/" +SLOT="0" +IUSE="" +KEYWORDS="~x86" + +MY_PN="${PN}Src" +SRC_URI="http://www.soe.ucsc.edu/~kent/src/${MY_PN}${PV}.zip" +S="${WORKDIR}/${MY_PN}" + +DEPEND="app-arch/unzip" +RDEPEND="" + +src_compile() { + MACHTYPE=$(tc-arch) + [[ ${MACHTYPE} == "x86" ]] && MACHTYPE="i386" + sed -i 's/-Werror//; s/CFLAGS=//;' "${S}/inc/common.mk" + sed -i 's/\(${STRIP} \)/#\1/' "${S}"/{*/makefile,utils/*/makefile,*/*.mk} + mkdir -p "${S}/bin/${MACHTYPE}" + emake MACHTYPE="${MACHTYPE}" HOME="${S}" || die "emake failed" +} + +src_install() { + MACHTYPE=$(tc-arch) + [[ ${MACHTYPE} == "x86" ]] && MACHTYPE="i386" + dobin "${S}/bin/${MACHTYPE}/"* +} diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/blat/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> |