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authorOlivier Fisette <ribosome@gentoo.org>2004-09-29 23:37:14 +0000
committerOlivier Fisette <ribosome@gentoo.org>2004-09-29 23:37:14 +0000
commit35a206a4e69a730744fed1213dc8b33a1c828dd9 (patch)
tree45997331ac77255c500f6390d3affcd0a603d244 /app-sci/rebase
parentWe release under GPL v2. (Manifest recommit) (diff)
downloadgentoo-2-35a206a4e69a730744fed1213dc8b33a1c828dd9.tar.gz
gentoo-2-35a206a4e69a730744fed1213dc8b33a1c828dd9.tar.bz2
gentoo-2-35a206a4e69a730744fed1213dc8b33a1c828dd9.zip
Added x86 to 408. New version 409. Removed old version.
Diffstat (limited to 'app-sci/rebase')
-rw-r--r--app-sci/rebase/ChangeLog8
-rw-r--r--app-sci/rebase/Manifest6
-rw-r--r--app-sci/rebase/files/digest-rebase-4063
-rw-r--r--app-sci/rebase/files/digest-rebase-4091
-rw-r--r--app-sci/rebase/rebase-408.ebuild4
-rw-r--r--app-sci/rebase/rebase-409.ebuild (renamed from app-sci/rebase/rebase-406.ebuild)23
6 files changed, 20 insertions, 25 deletions
diff --git a/app-sci/rebase/ChangeLog b/app-sci/rebase/ChangeLog
index eee5884af74e..4a5553520027 100644
--- a/app-sci/rebase/ChangeLog
+++ b/app-sci/rebase/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for app-sci/rebase
# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.4 2004/08/11 00:47:16 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.5 2004/09/29 23:37:14 ribosome Exp $
+
+*rebase-409 (29 Sep 2004)
+
+ 29 Sep 2004; Olivier Fisette <ribosome@gentoo.org> -rebase-406.ebuild,
+ rebase-408.ebuild, +rebase-409.ebuild:
+ Added x86 to 408. New version 409. Removed old version.
*rebase-408 (10 Aug 2004)
diff --git a/app-sci/rebase/Manifest b/app-sci/rebase/Manifest
index eeacff671012..00bc2675d05f 100644
--- a/app-sci/rebase/Manifest
+++ b/app-sci/rebase/Manifest
@@ -1,6 +1,6 @@
-MD5 ef37263ca49ac9c49b8ed86ebe2adee6 rebase-406.ebuild 1328
+MD5 2d35c31a5e840eeb53b600770d7e0639 rebase-409.ebuild 1107
MD5 1ed7c89d2cecacfc4ceb0bb12635ec13 ChangeLog 679
MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900
-MD5 2d35c31a5e840eeb53b600770d7e0639 rebase-408.ebuild 1107
-MD5 5c893447661466e2d82999d79bb60324 files/digest-rebase-406 165
+MD5 4bf8156dfa2cdd4691639553a019c4ee rebase-408.ebuild 1106
MD5 6e48271e9b6e7a6e881545322a6fcc55 files/digest-rebase-408 63
+MD5 a23b7eeb77c447d4949727f5a083859c files/digest-rebase-409 63
diff --git a/app-sci/rebase/files/digest-rebase-406 b/app-sci/rebase/files/digest-rebase-406
deleted file mode 100644
index 002f12e882b5..000000000000
--- a/app-sci/rebase/files/digest-rebase-406
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 6406212459e137bf99a00b808b995e97 withrefm.406 2243330
-MD5 35fa96bc864f50c458e0bebe8ed5bec4 proto.406 12443
-MD5 cd1733eeee660c2800f14ea82ebc8a4d REBASE.DOC 45518
diff --git a/app-sci/rebase/files/digest-rebase-409 b/app-sci/rebase/files/digest-rebase-409
new file mode 100644
index 000000000000..4e2e8944a9bc
--- /dev/null
+++ b/app-sci/rebase/files/digest-rebase-409
@@ -0,0 +1 @@
+MD5 abac98c5a4a64fc7028f31c97d044b63 rebase-409.tar.bz2 175468
diff --git a/app-sci/rebase/rebase-408.ebuild b/app-sci/rebase/rebase-408.ebuild
index d8cb4e339373..b2fb8ee57860 100644
--- a/app-sci/rebase/rebase-408.ebuild
+++ b/app-sci/rebase/rebase-408.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2004 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-408.ebuild,v 1.1 2004/08/11 00:47:16 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-408.ebuild,v 1.2 2004/09/29 23:37:14 ribosome Exp $
DESCRIPTION="A restriction enzyme database"
HOMEPAGE="http://${PN}.neb.com"
@@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~x86 ~ppc"
+KEYWORDS="x86 ~ppc"
IUSE="no-emboss no-rawdb"
src_compile() {
diff --git a/app-sci/rebase/rebase-406.ebuild b/app-sci/rebase/rebase-409.ebuild
index a7c333e923ec..28e5617a76b8 100644
--- a/app-sci/rebase/rebase-406.ebuild
+++ b/app-sci/rebase/rebase-409.ebuild
@@ -1,42 +1,33 @@
# Copyright 1999-2004 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-406.ebuild,v 1.4 2004/08/11 00:47:16 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-409.ebuild,v 1.1 2004/09/29 23:37:14 ribosome Exp $
DESCRIPTION="A restriction enzyme database"
HOMEPAGE="http://${PN}.neb.com"
-SRC_URI="ftp://ftp.neb.com/pub/${PN}/withrefm.${PV} \
- ftp://ftp.neb.com/pub/${PN}/proto.${PV} \
- ftp://ftp.neb.com/pub/${PN}/REBASE.DOC"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="x86 ~ppc"
+KEYWORDS="~x86 ~ppc"
IUSE="no-emboss no-rawdb"
-S=${WORKDIR}
-
-src_unpack() {
- einfo "No archive to unpack."
-}
-
src_compile() {
# Index the database for use with emboss if emboss is installed and
# the user did not explicitly request not to index the database.
if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then
einfo "Indexing ${PN} for usage with EMBOSS."
mkdir REBASE
- EMBOSS_DATA=. rebaseextract -auto -infile ${DISTDIR}/withrefm.${PV} \
- -protofile ${DISTDIR}/proto.${PV} || die \
- "Indexing ${PN} failed."
+ EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
+ -protofile proto.${PV} || die "Indexing ${PN} failed."
fi
}
src_install() {
if ! use no-rawdb; then
insinto /usr/share/${PN}
- doins ${DISTDIR}/withrefm.${PV} ${DISTDIR}/proto.${PV}
+ doins withrefm.${PV} proto.${PV}
fi
- newdoc ${DISTDIR}/REBASE.DOC README
+ newdoc REBASE.DOC README
if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then
insinto /usr/share/EMBOSS/data/REBASE
doins REBASE/{embossre.enz,embossre.ref,embossre.sup}