# Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-libs/cctbx/cctbx-2010.03.29.2334-r3.ebuild,v 1.8 2011/06/21 15:36:26 jlec Exp $ EAPI="3" PYTHON_DEPEND="2" inherit eutils fortran-2 prefix python toolchain-funcs MY_PV="${PV//./_}" DESCRIPTION="Computational Crystallography Toolbox" HOMEPAGE="http://cctbx.sourceforge.net/" SRC_URI="http://cci.lbl.gov/cctbx_build/results/${MY_PV}/${PN}_bundle.tar.gz -> ${P}.tar.gz" LICENSE="cctbx-2.0" SLOT="0" KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux" IUSE="+minimal openmp threads" RDEPEND=" virtual/fortran >dev-libs/boost-1.39 sci-libs/clipper sci-libs/fftw !minimal? ( sci-chemistry/cns sci-chemistry/shelx )" DEPEND="${RDEPEND} >=dev-util/scons-1.2" S="${WORKDIR}" MY_S="${WORKDIR}"/cctbx_sources MY_B="${WORKDIR}"/cctbx_build pkg_setup() { use openmp && FORTRAN_NEED_OPENMP="1" fortran-2_pkg_setup if use openmp && ! tc-has-openmp; then ewarn "You are using gcc and OpenMP is only available with gcc >= 4.2 and icc" ewarn "If you want to build ${PN} with OpenMP, abort now," ewarn "and switch CC to an OpenMP capable compiler" fi python_set_active_version 2 } src_prepare() { local opts local optsld epatch \ "${FILESDIR}"/${PV}-tst_server.py.patch \ "${FILESDIR}"/${PV}-boost.patch \ "${FILESDIR}"/${PV}-clipper.patch \ "${FILESDIR}"/${PV}-flags.patch \ "${FILESDIR}"/${PV}-soname.patch eprefixify "${MY_S}"/scitbx/libtbx_refresh.py rm -rf "${MY_S}/scons" "${MY_S}/boost" "${MY_S}/PyCifRW" || die find "${MY_S}/clipper" -name "*.h" -delete || die echo "import os, sys; os.execvp('scons', sys.argv)" > "${MY_S}"/libtbx/command_line/scons.py } src_configure() { local compiler local myconf myconf="${MY_S}/libtbx/configure.py" compiler=$(expr match "$(tc-getCC)" '.*\([a-z]cc\)') myconf="${myconf} --compiler=${compiler}" # Additional USE flag usage check_use openmp myconf="${myconf} --enable-openmp-if-possible=${USE_openmp}" use threads && USEthreads="--enable-boost-threads" && \ ewarn "If using boost threads openmp support is disabled" myconf="${myconf} ${USE_threads} --scan-boost --use_environment_flags" mkdir "${MY_B}" && myconf="${myconf} --current_working_directory=${MY_B}" cd "${MY_B}" myconf="${myconf} --build=release fftw3tbx rstbx smtbx mmtbx clipper_adaptbx fable" einfo "configuring with ${python} ${myconf}" $(PYTHON) ${myconf} || die "configure failed" } src_compile() { local makeopts_exp cd "${MY_B}" makeopts_exp=${MAKEOPTS/j/j } makeopts_exp=${makeopts_exp%-l[0-9]*} source setpaths_all.sh einfo "compiling with libtbx.scons ${makeopts_exp}" libtbx.scons ${makeopts_exp} .|| die "make failed" } src_test(){ source "${MY_B}"/setpaths_all.sh libtbx.python $(libtbx.show_dist_paths boost_adaptbx)/tests/tst_rational.py && \ libtbx.python ${SCITBX_DIST}/run_tests.py ${MAKEOPTS_EXP} && \ libtbx.python ${CCTBX_DIST}/run_tests.py ${MAKEOPTS_EXP} \ || die "test failed" } src_install(){ # find cctbx_build/ -type f \( -name "*.py" -o -name "*sh" \) -exec \ # sed -e "s:${MY_S}:${EPREFIX}/usr/$(get_libdir)/cctbx/cctbx_sources:g" \ # -e "s:${MY_B}:${EPREFIX}/usr/$(get_libdir)/cctbx/cctbx_build:g" \ # -i '{}' \; || die "Fail to correct path" sed \ -e "s:${MY_B}:${EPREFIX}/usr:g" \ -e "s:${MY_S}:${EPREFIX}/$(python_get_sitedir):g" \ -i "${MY_B}/libtbx_env" || die insinto /usr/share/cctbx doins "${MY_B}/libtbx_env" || die ebegin "removing unnessary files" rm -r "${S}"/cctbx_sources/{clipper,ccp4io,ucs-fonts,TAG} || die "failed to remove uneeded scons" find "${S}" -type f -name "*conftest*" -delete || die "failed to remove uneeded *.o" find "${S}" -type f -name "*.o" -delete || die "failed to remove uneeded *.o" find "${S}" -type f -name "*.c" -delete || die "failed to remove uneeded *.c" find "${S}" -type f -name "*.f" -delete || die "failed to remove uneeded *.c" find "${S}" -type f -name "*.cpp" -delete || die "failed to remove uneeded *.cpp" find "${S}" -type f -name "*.pyc" -delete || die "failed to remove uneeded *.pyc" find "${S}" -type f -name "SCons*" -delete || die "failed to remove uneeded *.pyc" find "${S}" -type f -name "Makefile" -delete || die "failed to remove uneeded *.pyc" find "${S}" -type f -name "config.log" -delete || die "failed to remove uneeded *.pyc" find "${S}" -type d -empty -delete || die find "${MY_B}" -maxdepth 1 -type f -delete || die eend dobin "${MY_B}"/bin/* || die rm -rf "${MY_B}/bin" dolib.so "${MY_B}"/lib/lib* || die rm -f "${MY_B}"/lib/lib* insinto /usr/include doins -r "${MY_B}"/include/* || die rm -rf "${MY_B}/include" insinto /usr/libexec/${PN} doins -r "${MY_B}"/* || die find "${ED}"/usr/libexec/${PN} -type f -exec chmod 755 '{}' \; cd "${MY_S}" insinto $(python_get_sitedir) doins -r * || die exeinto $(python_get_sitedir) doexe "${MY_B}"/lib/* || die rm -rvf "${MY_B}/lib" sed \ -e "/PYTHONPATH/s:${MY_S}:$(python_get_sitedir):g" \ -e "/PYTHONPATH/s:${MY_B}:$(python_get_sitedir):g" \ -e "/LD_LIBRARY_PATH/s:${MY_B}/lib:${EPREFIX}/usr/$(get_libdir):g" \ -e "/PATH/s:${MY_B}/bin:${EPREFIX}/usr/bin:g" \ -e "/PATH/s:${MY_B}/exe:${EPREFIX}/usr/bin:g" \ -e "/exec/s:${MY_S}:$(python_get_sitedir):g" \ -e "/LIBTBX_BUILD/s:${MY_B}:${EPREFIX}/usr/share/cctbx:g" \ -e "s:${MY_B}/exe_dev/:${EPREFIX}/usr/libexec/${PN}/exe_dev/:g" \ -i "${ED}"/usr/bin/* || die } pkg_postinst () { python_mod_optimize boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx chiltbx clipper_adaptbx crys3d fable fftw3tbx gltbx iotbx libtbx mmtbx omptbx rstbx scitbx smtbx spotfinder tntbx } pkg_postrm () { python_mod_cleanup boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx chiltbx clipper_adaptbx crys3d fable fftw3tbx gltbx iotbx libtbx mmtbx omptbx rstbx scitbx smtbx spotfinder tntbx } check_use() { for var in $@; do if use ${var}; then printf -v "USE_$var" True else printf -v "USE_$var" False fi shift done }