# Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/cns/cns-1.1.ebuild,v 1.8 2010/12/17 07:54:48 jlec Exp $ inherit eutils toolchain-funcs MY_PN="${PN}_solve" MY_P="${MY_PN}_${PV}" DESCRIPTION="Crystallography and NMR System" HOMEPAGE="http://cns.csb.yale.edu/" SRC_URI="${MY_P}_basic_inputs.tar.gz ${MY_P}_data.tar.gz test? ( ${MY_P}_test.tar.gz )" LICENSE="cns" SLOT="0" KEYWORDS="ppc x86" IUSE="test" RDEPEND="app-shells/tcsh" DEPEND="${RDEPEND}" S="${WORKDIR}/${MY_P}" RESTRICT="fetch" pkg_nofetch() { einfo "Fill out the form at http://cns.csb.yale.edu/cns_request/" einfo "and place these files:" einfo ${A} einfo "in ${DISTDIR}." } get_fcomp() { case $(tc-getFC) in *gfortran* ) FCOMP="gfortran" ;; ifort ) FCOMP="ifc" ;; * ) FCOMP=$(tc-getFC) ;; esac } src_unpack() { get_fcomp unpack ${A} # The length of time must be at least 10, not 9 # http://gcc.gnu.org/ml/fortran/2006-02/msg00198.html epatch "${FILESDIR}"/${PV}-time-length-10.patch # Set up location for the build directory # Uses obsolete `sort` syntax, so we set _POSIX2_VERSION sed -i \ -e "s:_CNSsolve_location_:${S}:g" \ -e "17 s:\(.*\):\1\nsetenv _POSIX2_VERSION 199209:g" \ "${S}"/cns_solve_env } src_compile() { local GLOBALS if [[ $(tc-getFC) =~ g77 ]]; then GLOBALS="-fno-globals" fi # make install really means build, since it's expected to be used in-place emake \ CC="$(tc-getCC)" \ F77=$(tc-getFC) \ LD=$(tc-getFC) \ CCFLAGS="${CFLAGS} -DCNS_ARCH_TYPE_\$(CNS_ARCH_TYPE) \$(EXT_CCFLAGS)" \ F77OPT="${FFLAGS:- -O2} \$(CNS_MALIGN_I86)" \ F77STD="${GLOBALS}" \ LDFLAGS="${LDFLAGS}" \ g77install \ || die "emake failed" } src_test() { # We need to force on g77 manually, because we can't get aliases working # when we source in a -c einfo "Running tests ..." csh -c \ "setenv CNS_G77; source cns_solve_env; make run_tests" \ || die "tests failed" einfo "Displaying test results ..." cat "${S}"/*_g77/test/*.diff-test } src_install() { # Install to locations resembling FHS sed -i \ -e "s:${S}:usr:g" \ -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_ROOT usr:g" \ -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DATA \$CNS_ROOT/share/data:g" \ -e "s:^\(setenv CNS_SOLVE.*\):\1\nsetenv CNS_DOC \$CNS_ROOT/share/doc/${PF}:g" \ -e "s:CNS_MODULE \$CNS_SOLVE/modules:CNS_MODULE \$CNS_DATA/modules:g" \ -e "s:\$CNS_LIB:\$CNS_DATA:g" \ -e "s:CNS_HELPLIB \$CNS_SOLVE/helplib:CNS_HELPLIB \$CNS_DATA/helplib:g" \ -e "s:\$CNS_SOLVE/bin/cns_info:\$CNS_DATA/bin/cns_info:g" \ "${S}"/cns_solve_env # Get rid of setup stuff we don't need in the installed script sed -i \ -e "83,$ d" \ -e "37,46 d" \ "${S}"/cns_solve_env newbin "${S}"/*_g77/bin/cns_solve* cns_solve \ || die "install cns_solve failed" # Can be run by either cns_solve or cns dosym cns_solve /usr/bin/cns # Don't want to install this rm -f "${S}"/*_g77/utils/Makefile dobin "${S}"/*_g77/utils/* || die "install utils failed" dobin "${S}"/bin/cns_{edit,header,transfer,web} || die "install bin failed" insinto /usr/share/cns doins -r "${S}"/libraries "${S}"/modules "${S}"/helplib doins "${S}"/bin/cns_info doins "${S}"/cns_solve_env dohtml \ -A iq,cgi,csh,cv,def,fm,gif,hkl,inp,jpeg,lib,link,list,mask,mtf,param,pdb,pdf,pl,ps,sc,sca,sdb,seq,tbl,top \ -f all_cns_info_template,omac,def \ -r doc/html/* # Conflits with app-text/dos2unix rm -f "${D}"/usr/bin/dos2unix } pkg_postinst() { ewarn "You must source ${ROOT}usr/share/cns/cns_solve_env" ewarn "before running CNS. It's a C-shell script," ewarn "so you also must be using csh or tcsh." }