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Diffstat (limited to 'sci-chemistry/refmac/refmac-5.6.0102.ebuild')
-rw-r--r--sci-chemistry/refmac/refmac-5.6.0102.ebuild73
1 files changed, 0 insertions, 73 deletions
diff --git a/sci-chemistry/refmac/refmac-5.6.0102.ebuild b/sci-chemistry/refmac/refmac-5.6.0102.ebuild
deleted file mode 100644
index 6f00bbf10220..000000000000
--- a/sci-chemistry/refmac/refmac-5.6.0102.ebuild
+++ /dev/null
@@ -1,73 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/refmac/refmac-5.6.0102.ebuild,v 1.1 2011/01/28 15:39:11 jlec Exp $
-
-EAPI="2"
-
-inherit base toolchain-funcs versionator
-
-MY_PV="$(get_version_component_range 1-2)_source_v${PV}"
-
-DESCRIPTION="Macromolecular crystallographic refinement program"
-HOMEPAGE="http://www.ysbl.york.ac.uk/~garib/refmac"
-SRC_URI="
- ${HOMEPAGE}/data/refmac_experimental/${PN}${MY_PV}.tar.gz
- test? ( http://dev.gentooexperimental.org/~jlec/distfiles/test-framework.tar.gz )"
-
-SLOT="0"
-LICENSE="ccp4"
-KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux"
-IUSE="test"
-
-RDEPEND="
- >=sci-libs/ccp4-libs-6.1.3-r7
- sci-libs/mmdb
- >sci-libs/monomer-db-1
- virtual/blas
- virtual/lapack"
-DEPEND="${RDEPEND}"
-
-S="${WORKDIR}"
-
-PATCHES=(
- "${FILESDIR}"/${PV}-allow-dynamic-linking.patch
- )
-
-src_prepare() {
- base_src_prepare
- use test && epatch "${FILESDIR}"/5.5-test.log.patch
-}
-
-src_compile() {
- emake \
- FC=$(tc-getFC) \
- CC=$(tc-getCC) \
- CXX=$(tc-getCXX) \
- COPTIM="${CFLAGS}" \
- FOPTIM="${FFLAGS:- -O2}" \
- VERSION="" \
- XFFLAGS="-fno-second-underscore" \
- LLIBCCP="-lccp4f -lccp4c -lccif -lmmdb -lstdc++" \
- LLIBLAPACK="$(pkg-config --libs lapack blas)" \
- || die
-}
-
-src_test() {
- einfo "Starting tests ..."
- source "${EPREFIX}/etc/profile.d/40ccp4.setup.sh"
- export PATH="${WORKDIR}/test-framework/scripts:${S}:${PATH}"
- export CCP4_TEST="${WORKDIR}"/test-framework
- export CCP4_SCR="${T}"
- ln -sf refmac "${S}"/refmac5
- sed '/^ANISOU/d' -i ${CCP4_TEST}/data/pdb/1vr7.pdb
- ccp4-run-thorough-tests -v test_refmac5 || die
-}
-
-src_install() {
- for i in refmac libcheck FreeTwin header2matr; do
- exeinto /usr/libexec/ccp4/bin/
- doexe ${i} || die
- dosym ../libexec/ccp4/bin/${i} /usr/bin/${i}
- done
- dosym refmac /usr/bin/refmac5 || die
-}