sci-biology/rebase: Version BUmp; Drop old

(Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)

6 files changed, 11 insertions, 188 deletions

diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index 1ba588975dfc..95ce4e3c6fba 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/rebase
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.137 2014/12/31 16:10:56 ago Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.138 2015/01/04 11:28:58 jlec Exp $
+
+*rebase-1501 (04 Jan 2015)
+
+  04 Jan 2015; Justin Lecher <jlec@gentoo.org> -rebase-1403.ebuild,
+  -rebase-1406.ebuild, -rebase-1408.ebuild, -rebase-1409.ebuild,
+  -rebase-1410.ebuild, +rebase-1501.ebuild:
+  Version BUmp; Drop old
 
   31 Dec 2014; Agostino Sarubbo <ago@gentoo.org> rebase-1411.ebuild:
   Stable for ppc, wrt bug #531422
diff --git a/sci-biology/rebase/rebase-1403.ebuild b/sci-biology/rebase/rebase-1403.ebuild
deleted file mode 100644
index 0263cd4f7fe7..000000000000
--- a/sci-biology/rebase/rebase-1403.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1403.ebuild,v 1.4 2014/08/03 18:37:36 ago Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE || die
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV}
-	fi
-	newdoc REBASE.DOC README
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup}
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ
-	fi
-}
diff --git a/sci-biology/rebase/rebase-1408.ebuild b/sci-biology/rebase/rebase-1408.ebuild
deleted file mode 100644
index e21898a25ab9..000000000000
--- a/sci-biology/rebase/rebase-1408.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1408.ebuild,v 1.1 2014/07/31 08:44:34 jlec Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE || die
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV}
-	fi
-	newdoc REBASE.DOC README
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup}
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ
-	fi
-}
diff --git a/sci-biology/rebase/rebase-1409.ebuild b/sci-biology/rebase/rebase-1409.ebuild
deleted file mode 100644
index b7a5477206a2..000000000000
--- a/sci-biology/rebase/rebase-1409.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1409.ebuild,v 1.1 2014/09/15 16:58:59 jlec Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE || die
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV}
-	fi
-	newdoc REBASE.DOC README
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup}
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ
-	fi
-}
diff --git a/sci-biology/rebase/rebase-1410.ebuild b/sci-biology/rebase/rebase-1410.ebuild
deleted file mode 100644
index c476acfa4535..000000000000
--- a/sci-biology/rebase/rebase-1410.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1410.ebuild,v 1.4 2014/12/31 16:00:50 ago Exp $
-
-EAPI=5
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-LICENSE="public-domain"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-IUSE="emboss minimal"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE || die
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV}
-	fi
-	newdoc REBASE.DOC README
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup}
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ
-	fi
-}
diff --git a/sci-biology/rebase/rebase-1406.ebuild b/sci-biology/rebase/rebase-1501.ebuild
index b09b646a59c8..50fb7148770d 100644
--- a/sci-biology/rebase/rebase-1406.ebuild
+++ b/sci-biology/rebase/rebase-1501.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1406.ebuild,v 1.1 2014/06/04 06:30:11 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1501.ebuild,v 1.1 2015/01/04 11:28:58 jlec Exp $
 
 EAPI=5